Glycine soja (wild soybean): 114380276
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Entry
114380276 CDS
T06057
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03030
DNA replication
gsj03410
Base excision repair
gsj03420
Nucleotide excision repair
gsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114380276
03410 Base excision repair
114380276
03420 Nucleotide excision repair
114380276
03430 Mismatch repair
114380276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsj03032
]
114380276
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114380276
DNA replication proteins [BR:
gsj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114380276
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114380276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
RCF1-5-like_lid
PTCB-BRCT
AAA_22
Rad17
AAA_19
AAA_assoc_2
RuvB_N
BRCT_2
AAA_30
nSTAND3
AAA_5
AAA_33
AAA_14
Zeta_toxin
Gp44_lid
RNA_helicase
AAA_16
DNAX_ATPase_lid
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
114380276
NCBI-ProteinID:
XP_028195080
LinkDB
All DBs
Position
12:8149109..8158736
Genome browser
AA seq
949 aa
AA seq
DB search
MSDIRKWFMKTHDKGNNAASSKPSNQPKPSSDKPHSEKTVAGGQESSGRRITSKYFNSNK
QKGKDKKEMQELPAKRKNMKDSEEIPEPKKIHEDDGDDSVLPTNKKKLADTTPTKKLKSG
SGRGLPQKSAVLEESDEDDDKDAVSAAKSAGRGDGGRGAPGRSTSGRGRGGGRGGFMNFG
ERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTN
YLLCDEDIGGRKSEKAKQLGTSFLTEDGLFDMIRGSKPAKAPSQEDKKPVNKAVAVASQS
KVSPKSQVKVPLSSRSPSKQAKPKTATTVQSSLMWTEKYRPKDPKDIIGNQSLVLQLRNW
LKAWNEHFLDTGNKKQGKKQNDSGLKKAVLLSGTPGIGKTTSATLVCQELGFQAIEVNAS
DSRGKADSKIEKGISGSKTNSVKELVTNEAIGINMGRSKHYKSVLIMDEVDGMSAGDRGG
VADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVAKAERL
QVNEIALEELAERVNGDMRMALNQLQYMSLSMSIINYDDIRQRFLTNAKDEDISPFTAVD
KLFGFNAGKLKMDERINLSMSDPDLVPLIIQENYINYRPSMAGKDDSGVKRMNLIARAAE
SIADGDIVNVQIRRYRQWQLSQTSSVATSIIPASLLHGQREILEQGERNFNRFGGWLGKN
STMGKNLRLLDDLHVHILASRESSSGRDTIRMEYLTLLLKQMTETLRTLPKAEAVQQVVE
FMNTYSISQEDFDTIVELSKFKGHPNPLDGIQPAVKSALTKAYKEQSTSRVVRVADLITL
PGVKKVPKKRIAAILEPAGEEVEKGEGDALDESEEENSSDTEELEGTTKGEKLQSELQSL
NSKATQVQLELKGTGNSSSKKTSGGRGKGVSVSGKKVAQAPKTTAKRKR
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatataaggaagtggttcatgaaaacacatgacaagggcaacaatgccgcttcc
tccaagccttccaatcaacctaagccttcttccgataaaccccattccgagaaaacggtg
gctggaggtcaggaaagttcagggaggaggataactagcaaatattttaattctaacaag
caaaaggggaaagacaagaaagaaatgcaggagctccctgctaaaagaaagaatatgaag
gacagtgaggaaataccggagccaaagaaaattcatgaagatgatggagatgactctgtg
ttgcccactaataaaaagaagttagctgacaccactccaacaaagaagttgaagagtgga
tcaggtagggggcttccccagaaatctgcagttttggaagaaagtgatgaagatgatgac
aaagatgctgtgtctgctgctaaatctgctggaaggggtgatggtggaagaggagcacca
gggcgatcaactagtgggagaggtagagggggtgggaggggtggattcatgaattttgga
gaaagaaaagatcctccacacaaaggagaaaaggaagtccctgaaggtgctcctgactgt
ttagctggcttgacttttgtgatcagtggaacactggacagtttggaacgagaagaagca
gaagatttgattaaacgccatggcggccgtgtcactggatcagtcagcaagaaaacgaat
tatctgttatgtgatgaagatattggggggcggaagtctgaaaaagccaaacagctagga
acttccttcctcacagaggatggtttgtttgatatgattcgtggctcaaaacctgcaaaa
gctccttcacaagaagacaagaaacctgtgaataaggctgttgcagtagcatcccagtca
aaagtttctccgaaatcacaagttaaggtccctctgtcttcacgctcaccttctaagcaa
gccaagccaaagactgctactactgttcagtcttctttgatgtggactgaaaaatatcga
cctaaagatccaaaggatatcatagggaatcagtcacttgttttacagcttcgtaattgg
ttgaaagcttggaatgagcattttttggacactggtaacaaaaagcagggaaaaaagcaa
aatgactctggtttgaaaaaagctgtcttgttaagtggaactcctggtattggaaaaaca
acttctgcgacgttggtctgtcaggagcttggtttccaagccatagaggtaaatgctagt
gatagccgtggaaaagctgatagcaaaattgaaaaaggaattagtggaagcaagacaaat
tctgttaaggaacttgtaaccaacgaggccattggtattaatatgggacggtcaaagcat
tacaaatctgtgctcattatggatgaagttgatgggatgtcagctggtgataggggtggt
gttgctgatcttattgctagcatcaagatatcaaaaattcctattatctgcatttgcaat
gaccgttacagccagaaactgaaaagccttgtgaactactgtttgcttctaagttttcgg
aagcctacaaagcaacagatggcaaagaggttgatggatgttgcaaaggctgaaagactt
caagttaatgagattgcacttgaggaattagcagaaagagttaatggagatatgcgaatg
gcactaaaccagttacagtatatgagcctctctatgtcaattatcaactatgatgatatt
aggcagcgctttcttaccaatgcaaaagatgaagacatttcaccattcacagctgttgat
aagctttttggttttaatgctgggaagttgaaaatggatgagaggataaatcttagcatg
agtgatcctgatcttgttcctcttattatccaggaaaattatattaattatagaccaagc
atggctggtaaggatgacagtggcgtaaaacgcatgaacctgattgcccgtgctgctgag
tctattgctgatggggatatagtgaatgtacagattcgcagatatcgacagtggcagctc
tctcaaactagttctgttgctacaagcataattcctgcgtcattgttacacgggcagagg
gaaatacttgaacagggagagcgaaatttcaaccggtttggtgggtggctggggaagaac
tcgacaatgggcaaaaacttaaggcttttggatgatcttcatgttcacattcttgcttct
cgtgaatctagttcaggaagggataccattcgcatggaataccttactcttcttcttaaa
caaatgacagagaccctgcgaaccctgcccaaggctgaagcagttcagcaagttgtggaa
tttatgaatacatactctatcagtcaggaagattttgatactattgtagagttatcaaaa
ttcaagggtcatcctaatccactagatggcatacagcctgccgttaagtcagccttgaca
aaagcatacaaagagcaaagcacatctcgggttgttcgagttgcagatctaatcactctt
cctggagtaaagaaggtccctaagaagcgtattgctgctattctggaaccagctggcgaa
gaagtggaaaaaggtgaaggtgatgccttggacgagagcgaagaggagaacagctctgat
acagaagagttggagggcaccaccaagggcgagaagctgcaatcagaacttcaaagcttg
aattcaaaggccacgcaagtacagttggaactgaagggaacgggaaattcaagttctaag
aagacatcgggtggtagaggtaaaggtgtttctgtatctgggaagaaggttgctcaagct
ccaaagactactgcaaaaagaaaaaggtga
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integrated database retrieval system
