KEGG   Glycine soja (wild soybean): 114380373
Entry
114380373         CDS       T06057                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03013  Nucleocytoplasmic transport
gsj03015  mRNA surveillance pathway
gsj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114380373
  09122 Translation
   03013 Nucleocytoplasmic transport
    114380373
   03015 mRNA surveillance pathway
    114380373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114380373
   03041 Spliceosome [BR:gsj03041]
    114380373
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     114380373
    TREX complex
     114380373
Spliceosome [BR:gsj03041]
 Complex C
  Other components
   EJC/TREX
    114380373
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114380373
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_10
Other DBs
NCBI-GeneID: 114380373
NCBI-ProteinID: XP_028195188
LinkDB
Position
12:complement(4812287..4816951)
AA seq 247 aa
MSAAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYATAKAPEATW
QHDLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRHAV
HYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVAPAPNGA
IGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKYH
AEAMQLN
NT seq 744 nt   +upstreamnt  +downstreamnt
atgtctgcagccatggatatgtcgctcgacgacataatcaagaacaacaaaaagtctgga
tccggaagttcacgtggccggacccgaccctccggatccggacctactcgccggctcccc
aaccgtgccgccaaccgcgccgcaccttatgccaccgctaaggcgccggaggcaacgtgg
cagcacgatttatatgcagatcagcatgtggctgcggcggggtaccctgctcaaggtggt
cgtgcggcttccatagaaactgggaccaagctttacatttcaaacttggattatggtgtt
tccaatgatgatattaaggaattgtttgctgaagtgggtgacttgaaacggcatgcggtt
cattatgacaggagtggcagatcaaagggtacagcagaagtagtattttcacgacgagct
gatgctgtatctgctgtaaagagatacaacaacgttcaattagatgggaaaccaatgaag
attgaaattgtgggaacaaacatttccacacctggtgtagctcctgctcctaacggagct
attggaaattttaatggagttcctcgaagtggacaaggaagaggtggggcattaagaagg
ccaggaggaagagggcaaggcattcgaagggatcggggacggggaagaggtcgtggtgga
ggaggccgtggcgaaaaggtatctgctgatgatcttgatgctgatttggagaagtatcat
gcagaggcaatgcaattgaactga

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