Glycine soja (wild soybean): 114380405
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Entry
114380405 CDS
T06057
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like isoform X1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114380405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114380405
Enzymes [BR:
gsj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
114380405
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
90S particles
Other 90S particles
114380405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
114380405
NCBI-ProteinID:
XP_028195239
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All DBs
Position
12:1824037..1826683
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AA seq
276 aa
AA seq
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MTRPYGVKGGRKRKHAEPKYDEEDQETQPKKAVVEVEHNKEEEQQQQTPEGDELSGIPIT
PSENNTNKPNVIFILEKASLEVAKVGKTYQLLNSDDHANFLRKNNKNPGDYRPDITHQSL
LSILDSPLNKAGRLRSVYIRTEKGVLIEVKPFVRIPRTFKRFAGVMLELLQKLSISAVGK
REKLLRTIKNPVTQYLPINSRKIGLSYSSEKLVDMDDYVSTVPSNMDLVFVVGAMAHGKI
ETDYTEDYVAISGYPLSAAYCITRITGALERKWKIL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaccttacggtgtgaaggggggccggaagcgaaagcacgccgaacccaaatac
gacgaagaagaccaagaaacgcaaccaaaaaaagctgtggtggaggtggagcacaacaaa
gaagaagaacaacagcaacaaacaccagagggggatgaattgagcggtatcccaattacg
cccagtgagaacaacaccaacaaacccaacgtcatcttcattctagaaaaagcttctttg
gaagtcgccaaagtcggcaagacatatcagctcttaaactccgacgaccatgccaatttc
ctccgcaaaaataacaagaatcccggagattacaggcctgacattactcatcagtccctt
ttatctattttggatagcccactaaataaagctgggagattgcggtcggtatacataagg
actgaaaaaggtgttcttatagaggttaagccctttgttcgtattccaagaacattcaaa
cgctttgctggtgtcatgttggaattgcttcaaaaattgagcatatctgctgttggcaag
cgcgagaaacttctccgaaccatcaaaaaccctgtcacgcagtatttgcctatcaactca
cgaaaaataggtctatcgtatagttcagaaaagcttgtagatatggatgactatgtatca
actgttcccagcaatatggaccttgtctttgtggtaggagcaatggcccatgggaagatt
gagacagattatacagaagattatgtagcaatttcggggtaccctctaagtgctgcttat
tgtattacaaggattactggtgcccttgagagaaagtggaagattttgtga
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