Glycine soja (wild soybean): 114380527
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Entry
114380527 CDS
T06057
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114380527
03015 mRNA surveillance pathway
114380527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114380527
03041 Spliceosome [BR:
gsj03041
]
114380527
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114380527
Spliceosome [BR:
gsj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
114380527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
114380527
NCBI-ProteinID:
XP_028195429
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Position
12:complement(4367306..4373528)
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AA seq
890 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWITRRVTELL
GFEDEVLINFIHSLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWMLLLSAQKNASGVPQ
QFLDAKEEELLKKKAESDLIASEIQRKKDKEGREIMEERLKKLDGGFDSKDNDTASDPTL
KPRDSGYYERDGKETDKRNGVRARSRFSRSPHSPAVSTSPHRGSPSRSMSKSFSNSRSYS
GGRHRSRSISRSPEARGRSRSFERIRHSPRRRSISPHRHSPRRSPYRRIPYSRRSRSPSP
VRRRMHSPVHRRSPSFRRRRSPSLVRRRRPPSPIRRRRSPSPVRRRRSPSPGRRRRSPSP
GPRHRSPSPGPRHKSPSPGRHHRSPSPLGRRRSLSPRRRRSVVTRHRSPSLVRRIPPTNV
RRRSDSPMQSPSPIRRRYGSRTPPHSPSPLRRRSPIPGKQRSPSISPQRSPRDEWSSQSP
IRRVSPSPIRKNSPRHKRSPLPSSMGRVRTQERLSSETRQPSSPLGSTRRDKSGKASHYK
SQDSMSTQEKSPIRSVSPEERSETSSEGRSPHESPMKQRREKLSNERSMSPLKKQRTQKP
SRDSPDTREEAEETYYSRESRDPKMNSSQKISKHSPISKRKGSPAKFRHEDFSPERVSGH
TASEHHYDNDDWSKKGREIKRDKSSRQGNEFPAQKSSINKETFSREKPQESYAVDVKKSD
DKDQSRSNYAKSSGRHHKSEATQDLVGKGDRVNHSASYDSVSEDSGKHRREGKDRKRHKR
SEKKYASSDEDYSDDSELEDRKEAKRRRKEEKKLRKEEKRRRREEKRRRREERRAEKLKM
KSKTDDISDDEEAKQMGYHQSDSEDEQKKLEIELRNKALESLKAKRGVNN
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggtttctttagaggcacatctgcggatcaggacactcggttttcgaacaag
caagcgaagctgatgaaatcgcagaagtttgcaccggaattggagcatctggtggacatg
acgaaggtgaatatggaagtgattaagccttggatcaccagaagggtgaccgagcttctt
gggtttgaagatgaagtgcttattaacttcatacacagtcttctggatgcaaaggaagtg
aatgggaaagaagttcaaatacaaattacaggatttatggaaaagaacactggaaagttc
atgaaagagctttggatgctgcttctcagtgcgcagaaaaatgccagtggtgttcctcag
cagttcttggatgccaaggaagaagaactcctgaagaagaaggctgaaagtgatctgatt
gcaagtgaaattcagaggaaaaaagataaggaaggtagagagatcatggaagagaggttg
aagaaactggacggtggatttgattcgaaggataatgatactgcatcagatccaactttg
aagcccagggattcagggtactacgagcgggatgggaaggaaactgataagaggaatggt
gtaagagcaaggagcaggttttctaggtctccacattcacctgcagtttccacttcgcct
catcgaggctcaccttcaaggtcaatgagcaaatcattttcaaattctcgaagttattca
ggtggtagacacaggtcaaggagtatatctaggtctccagaggctcgaggtcgctctcgt
tcttttgaaaggattcgtcattctccacgacgacggtctatttctcctcacaggcattca
ccacgacgttctccttataggaggataccttattcaagaagatctagatctccttctcct
gtacgacgtagaatgcattctccagttcatcgtagatcaccatcttttcgacgacgtaga
tcaccttctcttgtgcgacggcgtagaccaccttctccaatacgtcgacgtagatcacct
tcccctgtgcgtcggcgtagatcaccttcccctgggcgccgacgtagatcaccttccccc
gggcctcgacacagatcaccttctcccgggcctcgacacaaatcaccttctcctgggcgc
catcatagatcaccatcacctcttggacgacgaaggtcactctcacctagacgacgaaga
tcagttgttactcggcataggtcaccttcactagtacgccgaataccaccaaccaatgtg
cggagaagatcagactcccccatgcaatccccctcccccatacgacgaaggtatggtagt
agaactcctccacactctccatctccattgcgacgtagatcacctattcctggtaagcaa
agatctcctagtatctccccacagaggtctcctcgagatgaatggagttctcaatctcca
atacggcgtgtatctccatctccaatcaggaaaaattctccaagacacaaaagaagtccc
ttgccgtcttctatggggagagtcagaacacaagaaagattgtcatctgagactcggcaa
ccctctagtcccctggggtctacacgaagagataaaagtggcaaagcttcacactataaa
tcacaagattcaatgtccacacaagagaagtctccaattcgatctgtatctccagaagag
aggagtgagacaagcagtgaaggtcgaagtcctcatgagagccctatgaaacaaagaaga
gaaaagttgtccaatgaaagaagcatgagtcctctgaagaaacaaagaacccagaaacct
agccgtgacagcccagatacaagagaagaagcagaagaaacatactattccagagaaagc
agagatccaaaaatgaattcatcacaaaagatatcaaaacattcccccatcagtaagcga
aaaggttcacctgcaaaatttcgtcatgaggatttctctcctgaaagggtgtcaggtcat
acagcttctgaacatcattatgataacgatgattggagtaagaaaggccgggagataaaa
cgtgataaatcttccagacagggcaatgaatttcctgctcaaaagtcatcaatcaacaaa
gaaactttttccagggagaagcctcaagaatcttatgctgtagatgttaaaaaatcagat
gacaaggaccaatcccgttcaaactatgccaaaagtagtggtcgacaccacaaatccgaa
gccactcaagatttagttggaaaaggtgatcgtgtcaatcacagtgcttcatatgattct
gtttctgaggatagtggtaagcatagacgggagggaaaggataggaaaaggcataaaagg
tctgagaaaaagtatgcatcttctgatgaggattatagtgatgattctgagttagaggac
aggaaagaggctaagaggaggagaaaagaggagaagaagctgcggaaggaggagaagcgt
cgaagacgtgaagagaagcgacgcagaagggaagaacggcgtgcagagaagctgaaaatg
aagagtaaaacagacgatatttcagatgatgaggaagctaaacaaatgggttatcatcaa
agtgatagtgaagatgagcaaaagaagcttgagattgaattgcggaacaaggctcttgaa
tccctcaaagcaaagaggggcgtgaataactaa
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