Glycine soja (wild soybean): 114380780
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Entry
114380780 CDS
T06057
Name
(RefSeq) sister chromatid cohesion protein SCC2-like
KO
K06672
cohesin loading factor subunit SCC2
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114380780
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
114380780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
Cnd1
Motif
Other DBs
NCBI-GeneID:
114380780
NCBI-ProteinID:
XP_028195630
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All DBs
Position
13:15466987..15487100
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AA seq
1804 aa
AA seq
DB search
MSFPATSGASAAALSSSGHRGIGLSNTVHSELAACLPLPSLPVFCGASDQDLRLVDSPAR
LNRVDVLAQSAKIAELLRHTDVSYLNLRGEAKGVPYIYVEPLELHDEVIRCNPEAFEYST
AGPVKEQIYGSAVSEKRQPESSFPIQRETQKDYNATHSRQLDNFSTNDISSLSSKKSKIK
KKGGDGISVAPDSAELQGAYIERFREFLEDLCNKSEFNSDDRDEAEWLPLPLTDLRLLVN
EITSIREKKLLHLVPVEVLVRLLKVLDHQIHRAEGLSIEECDNSDSELVSSVLIALESIH
AALAVMAHTDMPKQLYKEEIIERILEFSRHQIMDVMCACDPSYRALHRPSENTAFEVDDY
EDNDAEFGSASKKRRTSKTSKLKKSVSSRVSTAVNTILQKLCTILGLLKDLLLIERLSDS
CILQLVKTSITTFLVDNIQLLQLKAISLLSAIFYLYTQHRTYVMDEVVQLLWKLPYSKRA
LRSYHIREEEQRQIQMVTALLIQLIHCSANLPDALRKASNGNAVLEASVDASYPIKCHEA
ATEACCLFWSRVLQRFASVKTHDASELKSIIENLVTDLLTTLNLPEYPASAPILEVLCVL
LLQNAGPKSKDVSARSLAIDILGTIAARLKRDALVCSQEKFWILQDLLNQDAAAQHHPKD
TCCVCLGGRVENLFICHGCQRLFHADCLGIKEHEVSSRNWSCQTCICHKKLLVLQSCCNS
QQKNDVKKNCNTDSEVSKQEIVQQLLLNYLQDVTSADDLHLFICWFYLCLWYKDDSNCQQ
KSSYYLARMKSKIIVRDSGTVSSILTRDSIKKITSALGQNSSFCRGFDKILHTLLASLME
NSPVIRAKALKAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHP
GVGFKYFEKIAERIKDTGVSVRKRAIKIIRDMCTSNANFSGFTRACTEIISRVSDDEASI
QDLVCKTFSEFWFEEPPASQTQVFGDGSTVPLEIVKKTEQIVEMLRGMPNNQLLVSVIKR
NLSLDFLPQSAKAVGVNPVSLAIVRKRCELMCKCLLEKMLQVDEMNNDGVEVGALPYVLV
LHAFCLVDPTLCAPASNPSQFVVTLQPYLKSQVDNRMVAQLLESILFIIDAVLPMLGKLP
PSIVGELEQDLKQMIVRHSFLTVVHACIKCLCSVSKMSGKGAAVVEQLIQFFFKCLDTQA
VDNKQKVGRSLFCLGLLIRYGNQLLASSSSKLIDVGRSVRLFMKYLSVEDFVVKVRSLQA
LGFVLIAKPEYMLENDVGKILEETLSSASDTRIKIQGLQNMFEYLLEAESQMGTDKNDEN
VAGYSVGAGHSVPVAAGAGDTNICGGIVQLYWDNILGRCLDFSEQVRQSALKIVEVVLRQ
GLVHPITCVPYLIALETDPLESNSKLAHHLLMNMNDKYPAFFESRLGDGLQMSFMFMQSI
CGSSENVDHKIQSKIPTSGKGKPEAGSLAQAKLGVSRIYKLIRGNRVSRNKFLSSIVRKF
DNPRWNKLVIAFLIYCTEVLALLPFISPDEPLYLIYAINRVVQVRAGPLEANFKAWSSSI
SRHNSPYGNGMYQQGPDEPTVTSQVMSLDLNGTFQQNVDVQPNSNDMRTLDLNGSNHQLP
DYPLSYMGSSEAKLHSAGYTDPFSFSNDDLEKVQADCLSAIALQLLLKLKRHLKIMYSLD
DARCQAYSPTEQPKPGEVISRQNIAFNIGDSQFSLPTSPQELIQRYQEFKHALREDTVDY
SHYTANIKRKRPTATPRRVQVRKPVYVAGGYDDGDDDGDYTGGSDMHKISFSGRRSSLRN
SRQY
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccctgccacctctggcgcctcggccgccgcgctgtcgtcctccggccaccgc
ggaatcggcctctccaacaccgtccactccgagctcgccgcgtgcctcccgctgccgtcc
ctcccggtcttctgcggcgcctccgatcaggacctccgcctcgtggactcgccggcgcgc
ctcaaccgcgtcgacgtgctcgctcagtccgccaagatcgccgagctgctccgccacacc
gatgtgtcgtacttgaatttaagaggtgaagccaaaggtgttccgtatatatatgttgag
cctttagaactccatgacgaagttatcaggtgcaatcctgaagcatttgaatacagcact
gcaggtcctgtcaaggagcagatctatggtagtgcagtatctgaaaaaaggcaaccggaa
tcaagttttcctatccaaagagagactcaaaaagactataatgcaacacatagtcgccag
cttgataatttttccacaaatgatatctcttcgttgtcttctaaaaaatcaaaaataaaa
aagaaaggtggtgatggaatatctgtagcacctgattctgctgagcttcaaggtgcctac
attgaaaggtttcgtgagtttttggaggacttgtgcaacaaatctgaatttaatagtgac
gatcgagatgaagcagaatggttgccattgcctcttacagatcttagattacttgtcaat
gaaataacatctattcgtgaaaagaaacttctgcatttggttcctgtagaagtcctagtt
agactattaaaagttctagatcatcagatacatagagcagaaggcctgtcaattgaggaa
tgtgataattctgattcagaattagtttcatctgttttaattgcattggagtccattcat
gctgcactagcagtgatggctcatactgatatgccaaagcaactctataaagaagagatc
attgagcgaattctggagttttccaggcatcaaataatggatgttatgtgtgcatgtgat
ccatcataccgtgcactacatagacctagtgaaaacactgcatttgaagttgatgattat
gaagataatgatgctgaatttggttcagccagcaagaaacggcgtactagcaagacttcg
aagttgaagaaatcagtatcaagcagggtctctactgctgtaaatactattcttcagaag
ctgtgcactattcttgggttactcaaagatttgttgttaatagagaggttatcagatagt
tgcatactacaacttgtaaaaacaagcattacgacatttttggttgataatatccagctt
ttgcaattgaaggcaatcagtttactcagtgcgatattctatttatacacacaacatcgc
acttatgtgatggatgaagtggttcaacttctgtggaaattaccatattcaaaacgagct
ttaaggtcttatcacatacgcgaggaagagcaaaggcagatccaaatggttactgctttg
ctgattcagttgattcattgtagtgctaacctccctgatgctttaagaaaagcttcaaat
ggtaatgctgtattagaagcctctgttgatgctagttatccaattaaatgccacgaggca
gcgacagaagcctgctgtctgttttggagccgggtacttcagcggtttgcaagtgtgaag
actcatgatgcttcggagctgaaatccataatagagaatcttgttacagatttactgaca
actttaaatttacctgaatatcctgcttcagctcctattctagaggtactctgtgtccta
ctacttcagaatgctgggccaaagtctaaggatgtctctgcacgttccctggcaattgat
attcttggtacaattgctgcaaggttgaagcgcgatgctttggtttgtagccaggaaaaa
ttctggatacttcaggatttacttaatcaggatgctgctgctcagcatcatccaaaagat
acatgttgtgtctgtttggggggaagggtagaaaatttgttcatatgtcatggttgccag
aggctttttcatgctgattgcctgggcattaaagaacatgaagtttccagtcgaaactgg
tcctgccagacatgcatctgtcataagaaactacttgtattacaatcatgttgcaattcc
cagcaaaagaatgatgtgaaaaagaattgcaatacagattctgaagtttctaagcaagag
attgttcaacagttgcttctgaattaccttcaagacgttacctctgctgatgatctgcat
cttttcatctgctggttttatctctgcttgtggtacaaagatgattcaaattgtcagcag
aagtccagttactaccttgctagaatgaaatcaaaaatcatagtacgagattctggtact
gtgtcttctatattgactagggattcaatcaagaagattacttcagctttaggccaaaac
agttcattttgccgaggatttgataaaattcttcacacgcttctggcaagcttgatggag
aactctccagttattagggctaaggctttaaaagcagttagtattattgtagaggctgat
ccagaggtattgggtgataagcgagtacaatcagctgttgaaggaaggttttgtgattct
gcgatatctgttagagaagcagcattggaacttgttggtaggcatattgcttcgcatcca
ggtgtgggttttaagtattttgagaagattgcagagagaatcaaagatactggagtaagt
gttcggaaacgagctatcaaaatcattcgagatatgtgcacttcaaatgccaacttctct
ggatttacaagagcttgcacagagataatttcacgtgttagtgatgatgaagcaagcatc
caggaccttgtttgcaaaacatttagtgagttttggtttgaggagcctcctgcatcacaa
actcaggtctttggggatggtagtactgttccacttgagatagttaagaaaacagagcaa
attgttgaaatgttgagaggaatgcccaataatcaacttcttgtaagtgtaataaagcgc
aatttgtcacttgattttttgccacaatctgcaaaagctgttggggtaaatccagtgtcc
cttgcaatagtgcgtaagcgttgtgaattgatgtgcaaatgcttgctggagaagatgttg
caggttgacgaaatgaacaatgatggagtggaagtgggtgcacttccatatgtgttagtc
ttgcatgcattttgtcttgtggacccaactctctgtgcaccagcttcaaacccttcccaa
tttgttgttacattgcagccatatctgaagagtcaggttgacaatcgcatggttgcacag
ctacttgagagtatactattcataattgatgctgtgcttcccatgcttgggaagttgcct
ccgagtattgttggggaactcgagcaagatttgaaacagatgattgtccggcattctttc
ttgacagttgtccatgcctgtatcaaatgcctctgctctgtgagtaagatgtctggaaaa
ggggctgctgtagttgaacaacttattcagttcttcttcaaatgtttggatactcaggca
gttgataacaaacagaaagttggacgatctctcttctgtcttgggttgcttatccgttat
ggcaatcaattgttagcaagctccagtagtaaactcattgatgttggacgcagtgtcaga
ttgtttatgaagtatctctctgtggaggattttgttgtcaaggttagatcactgcaggca
ctaggatttgttctaattgctaagcctgaatatatgttggaaaatgatgttggaaaaata
ctggaggaaacattatcctctgcgtctgatactcgcattaagattcaaggattgcaaaac
atgttcgagtatcttctagaagctgaaagccaaatgggaacagataaaaatgatgaaaat
gttgctggttattcagttggagctgggcatagtgtacctgttgctgctggtgctggggat
acaaacatatgtgggggtatagttcagttgtattgggataatattttgggcagatgtttg
gatttcagtgaacaagttcgtcaatcagccctgaagattgttgaagttgtgctgcgccaa
ggtcttgttcatccaatcacctgtgttccataccttatagcccttgaaacagatcctctg
gagtcgaattcaaagttggctcatcatcttctgatgaatatgaatgacaagtaccctgca
ttttttgaaagccgcttgggtgatggacttcaaatgtcatttatgtttatgcaatctatt
tgtggaagttctgaaaatgttgatcataagattcaatctaagatccctacttctggaaaa
gggaagcctgaggctgggtcacttgctcaagctaaacttggggtttctcgaatttacaag
ctcatccgagggaatcgggtatcaaggaacaaatttttgtcctcaatcgtgcggaaattt
gataatccaagatggaataaattagtaatagctttcttaatatactgcacagaagtccta
gcattgctgccattcatttcacctgatgagcccctttatttaatctatgctatcaatcga
gtagttcaagtaagggccggaccactagaagcaaactttaaagcctggagttcaagcatt
tcacgtcataactcaccttatgggaatggaatgtatcaacaggggccagatgagcctact
gttacaagccaagtaatgtcattggatttgaatggaacatttcagcaaaatgtagatgtt
cagccaaattccaatgacatgagaaccctggatttaaatggatcaaatcatcaactgcca
gattatcctttatcgtatatgggtagctcagaagcaaagctgcattctgcaggttacaca
gatcctttttccttctcaaatgatgatctggagaaagttcaggccgattgtttatcagca
attgcattgcagcttcttttgaagctcaagagacacctgaaaatcatgtatagtcttgat
gatgcccgttgtcaggcttattctcctaccgaacaaccgaaacctggagaggttatctcc
agacagaatattgcttttaatatcggtgattcacagttcagtttgcctacaagtccgcaa
gaattgatacaaagatatcaggaatttaaacatgctttgagggaagacactgtggactat
tcacattacactgcaaatataaaacgaaagcgacctacagccacaccaagaagagttcaa
gttcggaaacctgtatacgtggcaggtgggtacgatgatggggatgatgatggggattat
actggtggaagtgacatgcacaagataagttttagtggccgcaggagtagccttagaaac
tcaaggcaatattga
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integrated database retrieval system
