Glycine soja (wild soybean): 114380819
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Entry
114380819 CDS
T06057
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic-like isoform X1
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00300
Lysine biosynthesis
gsj00470
D-Amino acid metabolism
gsj01100
Metabolic pathways
gsj01110
Biosynthesis of secondary metabolites
gsj01230
Biosynthesis of amino acids
Module
gsj_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
114380819
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
114380819
Enzymes [BR:
gsj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
114380819
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Pox_Rif
Motif
Other DBs
NCBI-GeneID:
114380819
NCBI-ProteinID:
XP_028195679
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All DBs
Position
13:complement(25327875..25333196)
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AA seq
495 aa
AA seq
DB search
MNIIATSMAASHILYNPPPLSKTFINHPLNQNPSPQNLILPLKATIKPRVLRAVHSQKIT
ANSSLHNSDTRTRFQHCFTKSEDGLLYCEGLKVHEIMDSVERRPFYLYSKPQITRNVEAY
KDALEGLRSIIGYAIKANNNLKILEHLRQLGCGAVLVSGNELRLALRAGFDPTRCIFNGN
GKVLDDLVLAAKEGVFVNIDSEFDLENIIAAAKIAQKRVNVLLRINPDVDPQVHPYVATG
NKNSKFGIRNEKLQWFLDAVKEHPNELKLVGAHCHLGSTITKVDIFRDAAIIMVNYIDQI
RAQGFEVDYLNIGGGLGIDYQHSGAVLPTPRDLIDTVRELVLSRGLNLIIEPGRSLVANT
CCLVNRVTGVKTNGSKNFIVIDGSMAELIRPSLYDAYQHIELVSPAPANAEIANFDVVGP
VCESADFLGKDRQLPTPAKGTGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSVSKIR
HGETFEDHIRFFEGL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcattgccacttccatggctgcctcacacatcctttataatcctcctcccctt
tccaaaacttttattaatcaccctttgaaccaaaacccttctcctcaaaacctaattcta
ccactcaaagctactattaaaccgcgggttcttagagcagttcactcccagaagatcact
gctaactcctcgcttcataactccgatactaggactcgttttcagcactgtttcacaaag
agtgaagatgggcttttgtattgtgagggccttaaagtgcatgaaattatggattctgtt
gaaagaagacctttctacttgtacagtaaacctcaaattactagaaatgtggaagcttat
aaggacgccttggagggtttgaggtctataattggttatgccatcaaggccaacaataat
ttgaagattctggagcatttgaggcagttgggttgtggtgctgtgcttgtgagtgggaat
gagcttagattggctcttcgggctgggtttgatccgacaaggtgtatctttaatggcaat
gggaaagtcttggatgatttggtcttggctgccaaagaaggtgtttttgtcaacattgat
agtgaatttgacttggaaaacatcatagcagctgcaaaaattgctcaaaagagggtgaat
gttttactacggattaatcctgatgtggatccgcaggtccacccttatgttgcaacaggg
aataagaactccaaatttggcataagaaatgagaagctgcaatggtttctagatgctgtg
aaggagcatcctaatgagttaaagcttgtaggggcccactgccatcttgggtcaacaatc
accaaggttgacattttcagggatgctgccattattatggttaactacattgaccaaatc
cgagctcagggttttgaagttgattatttaaatattggtggtggacttgggatagattat
caacattctggtgctgtccttcctacacccagagatctcattgacactgtaagggagctt
gttctttcccgtggtcttaatctcattattgaaccagggagatcactcgttgcaaacact
tgttgcttagttaaccgggtgacaggtgtcaagaccaatggatctaaaaactttattgtg
attgatggaagcatggccgaacttatccgtcctagtctttatgatgcttaccagcatatc
gagctggtttcccctgccccagcgaatgctgagatagcaaattttgatgtggtcggccct
gtctgtgagtctgcggatttcttaggaaaagatagacaacttccaactccagccaagggt
accggtctggttgttcatgatgctggtgcttattgtatgagtatggcatcaacttacaat
ctaaagatgcggcctcctgagtattgggttgaagaagatggatcagtaagcaaaatcaga
catggggagacatttgaagaccacatccggttttttgagggcctttga
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