Glycine soja (wild soybean): 114380968
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Entry
114380968 CDS
T06057
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114380968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114380968
03009 Ribosome biogenesis [BR:
gsj03009
]
114380968
04131 Membrane trafficking [BR:
gsj04131
]
114380968
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsj04147
]
114380968
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
114380968
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
114380968
Membrane trafficking [BR:
gsj04131
]
SNARE
SNARE associated proteins
Others
114380968
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114380968
Exosome [BR:
gsj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114380968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_2
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_28
AAA_17
Mg_chelatase
nSTAND3
ATPase_2
Parvo_NS1
AAA_18
Vps4_C
IstB_IS21
ABC_tran
AAA_7
DUF815
Viral_helicase1
NB-ARC
AAA_24
TsaE
AAA_lid_PRS2_C
NACHT
Zeta_toxin
Sigma54_activat
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
114380968
NCBI-ProteinID:
XP_028195928
LinkDB
All DBs
Position
13:25629284..25633609
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AA seq
811 aa
AA seq
DB search
MANQPESSDAKGTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVVLHPNTMEKLQLFRGD
TILLKGKKRKDTICIALADETCEEPKIRMNKIVRNNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDMFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRKRDN
PEAMEEDIEEEEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSDFTFA
NTSSGGGGAATGTASDPFASAGGADEDDLYS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccaacccgagtcctctgatgctaagggaacgaagagagactttagcacggcg
atcctggaacgcaagaaagcgccaaaccggcttgtcgtcgacgaggctgtgaatgatgac
aattccgtcgtggtgcttcatcccaacactatggagaaactccagctcttccgtggtgac
actattctgctcaagggaaagaaaaggaaggatacaatttgtatcgcgcttgcggatgag
acttgtgaggagccgaagataaggatgaacaagattgtgaggaacaaccttagagttaga
cttggagatgttgtttccgttcaccagtgcgcggatgttaagtacggaaaacgtgtgcac
attcttcccgtggatgataccattgaaggggttactgggaatctctttgatgcttacttg
aaaccttatttccttgaggcatataggccagtgaggaagggtgatatgttccttgtgaga
ggggggatgagaagtgtggagttcaaggttattgaaactgatcctgctgagtactgtgtt
gttgctccagacactgagatcttctgtgagggagagcctgttaaaagggaagatgagaat
cggttagatgaggttggttatgatgatgttggtggtgttagaaagcagatggcgcagatt
agggaactggtggaactgccattgaggcatccacaattgttcaaatctattggtgttaag
ccaccaaaaggaattcttctatatggaccacctgggtctggtaagactttaattgctcgg
gctgttgcaaatgaaaccggtgccttctttttctgcattaacggccctgagatcatgtca
aaattggctggtgagagtgaaagcaatctcaggaaggcatttgaggaagctgaaaagaat
gcaccctctattatcttcattgatgagatagattcaatagctccaaagcgtgagaagact
catggggaggttgagaggagaattgtttcccagctcttgaccctcatggatgggcttaaa
tcccgtgcacatgtaattgttattggagccacgaatcgtcccaatagcattgaccctgct
cttaggaggtttggaagatttgatcgggagatagatattggtgttccagatgaagttggg
cgtctagaggttcttcgtatccatacaaaaaatatgaagctcgctgaagatgttgatttg
gaaaggattgccaaggacacccatggatatgttggtgctgatttggctgctttgtgtact
gaagctgctcttcagtgcatccgagagaaaatggatgtcattgacttggaagatgagacc
attgatgctgagatactgaactcaatggcagtgacaaatgagcatttccagactgccctt
ggaacaagcaatccttctgctctccgagaaacagttgttgaagtgcccaatgtcagctgg
gaagatattggtggtcttgaaaatgtgaagagagaactccaagagactgttcaatatcca
gtggagcaccctgaaaaatttgagaagtttggaatgtcaccttccaagggggttcttttc
tatggtcctcctggttgtggtaaaacccttttggcgaaagctattgccaatgaatgtcag
gcaaatttcatcagtgtcaaaggtcccgagctactcacaatgtggtttggagaaagtgag
gcaaatgtgagggagatttttgacaaagctcgtggttctgctccatgtgtcctattcttt
gacgaacttgactctattgcaactcagagaggcagcagtgtaggagatgctggtggtgct
gctgacagggttttgaatcaattgcttacagagatggatgggatgtcagcaaagaaaact
gtgttcatcattggggccactaatcgaccagacattatagatcccgcacttctgcgacca
ggtcgtctggaccaattgatttatatcccactcccagatgaggattcccgtcatcagata
tttaaagcttgcttgagaaaatctcctgtctcaaaagatgttgaccttagagctcttgcc
aagtatactcaagggttcagtggtgcagatattactgaaatttgccagcgtgcatgcaag
tatgctataagagagaacattgagaaggacattgagagagaaaggaggaaaagagataac
cctgaggccatggaagaggatattgaagaggaagaggtagctgaaatcaaggcagcacat
tttgaagaatcaatgaagtatgcacgaaggagtgtaagtgatgctgacattcgcaagtac
caggcttttgcacaaacattgcagcagtcgagagggtttggatctgacttcacttttgca
aataccagctctggtggtggtggtgctgccactggcactgcatccgacccttttgcaagt
gctggtggagctgatgaagatgatctttacagttag
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