Glycine soja (wild soybean): 114381511
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Entry
114381511 CDS
T06057
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04120
Ubiquitin mediated proteolysis
gsj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114381511
04120 Ubiquitin mediated proteolysis
114381511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114381511
Enzymes [BR:
gsj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114381511
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
U-box type E3
114381511
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
114381511
NCBI-ProteinID:
XP_028196587
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All DBs
Position
13:15640362..15649907
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AA seq
1038 aa
AA seq
DB search
MAAAKPQRTPQEVEDIIIRKIFLVSITEIANSNTTTNSKIVYLELTAAEILSEGKELRLS
RDCMERVLIDRLSGEFAGAGDESPFQYLVGCYHRAHEEGKKISNMKDKNLRSEMETVVRQ
AKKLCVNYCRIHLANPELFPSRGSASTGANSPLLLLIFAEVGGGNVFGGGGGGGAKSPPG
FLEEFFRDPDFDSLDKILKGLYEELRGSVMKVSALGNFQDSLRALLYLVRFPIGAKSLVN
HEWWIPKGVYVNGRAIEMTSILGPFFHISALPDQAFFKGQPDVGQQCFSDASTRRPADLL
SSFSTIKTVMNNLYDGLAEVLLILLKSQDTRENVLKYLAEVININASRAHIQVDPITCAS
SGMFVNLSAVVLRLCEPFLDANLTKRDKIDAKYVHYSNRLKLSGLTALHASSEEVIEWLN
SKNPAKTGATNQYNDDQKRLQQSQEASSSGSNADELSNENSARAEKTKYSFICECFFMTA
RVLNLGLLKAFSDFKHLVQDISRCEDALSTLKAMQERTPTPQAELDINRLEKEMELYSQE
KLCYEAQILRDNTLIQNALSFYRLMIVWLVGLVGGLKMPLPPTCPMEFSTMPEHFVEDAM
ELLIFASRIPKALDGVVLDEFMNFIIMFMASPEFIKNPYLRAKMVEVLNCWMPRRSGSTA
TATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRN
AWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPVQER
QERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLV
GPQRKSLSLKDPEKYEFRPKHLLKQIVHIYVHLARGDTNSIFPAAISKDGRSYNDQLFSA
GADVLHRIGEDGRIIQEFIQLGAKAKVAASEAMDTEATLGEIPDEFLDPIQYTLMKDPVI
LPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPDDELKARIEEFVRSQEMKKHLSL
QSTKATIQTTNGETMLID
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcaaaaccccaacgcactccacaggaagtggaggacatcatcatccgcaaa
atcttcctcgtctcgatcaccgaaatcgccaacagcaacaccaccaccaattcgaaaatc
gtgtatctggaactgaccgccgccgagattctcagcgagggcaaagagctccgcctctcg
cgcgattgcatggagagggttttaattgaccgtctctccggcgaattcgccggcgccgga
gacgagtctccgttccagtacctcgtcggctgctaccaccgcgcgcacgaggaggggaag
aaaatctcgaacatgaaggacaagaacttgcggtcggagatggagacggtggtgaggcag
gccaagaagctctgcgtcaactactgccggattcatttagcaaatcccgagctcttcccg
agccggggttcggcgagtaccggcgccaattcgccgctgctgctgctgattttcgcggag
gtaggcggcgggaatgtgtttggtggcggcggcggcggaggtgcaaagagtccgccgggg
tttctggaggagtttttcagggaccctgattttgacagcttggacaagattctgaagggt
ttatatgaggagctgagagggagtgtgatgaaggtgtctgctcttgggaactttcaggac
tcattaagggctttgttgtatttggttaggtttccaattggtgccaagtcacttgtgaat
catgagtggtggattcccaaaggggtttatgtgaatggccgtgctattgagatgaccagc
attttgggtcccttttttcatatcagtgctcttcctgatcaagcttttttcaaggggcag
cctgatgttgggcagcagtgtttttctgatgcatcaactaggcgaccagctgatttgtta
tcttcattttccactatcaaaactgtcatgaacaacttatatgatggcctagctgaagta
ctcctcatcctccttaaaagtcaagatactcgtgaaaatgtactcaagtatcttgcggag
gtgatcaatataaatgcatccagggctcatatacaggttgaccctattacttgtgcaagt
tcaggcatgtttgtaaatctcagtgctgtcgtgcttcgtctatgtgagccatttttagat
gcaaatttaacaaaaagggataaaattgatgcaaaatatgtgcactactcaaaccgcttg
aagctaagtgggttgactgctcttcatgcatcatcagaagaagttattgaatggcttaat
agtaaaaacccagctaagactggggcaaccaatcaatataatgatgatcagaaacgcttg
caacaatcccaagaggccagtagctctggtagtaatgctgatgagctctcaaatgaaaat
tctgcacgtgctgaaaagacgaaatattcatttatttgcgaatgcttctttatgaccgca
agagtgctcaacttaggccttttaaaagcattttctgacttcaaacacttagttcaggat
atttctaggtgtgaagatgctctctccacacttaaagccatgcaggagcgaacacccact
cctcaggcagaattggatataaatcgacttgagaaagaaatggaattgtactcacaggaa
aaactatgttatgaagctcagatattgagggataacacacttattcaaaatgcgctttcc
ttctaccgcttgatgattgtttggttggttggcttggtgggtggattaaagatgcctcta
ccaccaacttgcccaatggaattttctaccatgcctgaacattttgtggaagatgccatg
gaacttttaatatttgcttcccggattccaaaggccttagatggagttgtgctggatgaa
tttatgaacttcataattatgttcatggccagccctgaatttatcaaaaacccatacctg
agagcaaagatggttgaagtcttgaactgctggatgccccgtaggagcggctcaactgct
acagccaccctatttgaaggtcaccaactctctcttgagtatcttgtgaggaatcttctg
aaactttatgttgacattgagttcactggttctcacacacagttctatgataagtttaac
atccgccataatattgccgaactcctcgaatacttgtggcaagtccctagtcatcgtaat
gcttggagacagattgctaaggaggaggaaaagggtgtctatctgaatttcttaaacttt
ttgattaatgatagtatttatcttcttgatgaaagtctgaacaaaattcttgagctaaaa
gaattggaggctgagatgtcaaatacagttgagtgggagagacgaccagttcaagagagg
caggagaggacccggttattccattctcaagaaaatattattcggatagatatgaagttg
gcaaatgaagatgtcagcatgcttgcatttacttcagagcagattactgctccattccta
cttcctgagatggttgaaagagtggctagcatgctcaattactttctgctgcaattggtg
ggtcctcaaagaaaatcgcttagtctgaaggatcctgagaagtatgaatttcgtccaaag
catttgctaaaacagattgtgcacatatatgttcatctagccaggggtgacacgaattcc
atcttcccagctgccatctcaaaggatggtcgatcatacaatgatcagttgtttagtgct
ggggctgatgttcttcacagaattggcgaggatgggagaattatacaggaatttattcaa
cttggcgcaaaagctaaagttgctgcttcagaggccatggatactgaagccactctaggg
gagataccagatgaattccttgatccaattcaatacacattgatgaaggatccagttatc
ttgccttcttcaaggatcacggttgatcgtcctgtcattcagaggcatcttcttagtgat
agtactgatccattcaaccgttctcatcttaccgcggatatgttgattcccgacgatgag
ctaaaagcaagaattgaggagtttgtcaggtctcaggaaatgaagaaacacttaagccta
cagagcaccaaggccacaattcagactacaaatggggaaacaatgttgattgattag
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integrated database retrieval system
