Glycine soja (wild soybean): 114381828
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Entry
114381828 CDS
T06057
Name
(RefSeq) protein GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114381828
03015 mRNA surveillance pathway
114381828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114381828
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114381828
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GLE1
DUF5388
Motif
Other DBs
NCBI-GeneID:
114381828
NCBI-ProteinID:
XP_028196854
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Position
13:complement(30533840..30546881)
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AA seq
651 aa
AA seq
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MGAVKLNLRCSSQRVDGVAAEPEPDWTFDDLVSELNALETKLATNASSSTQRSSPLDKSI
SKCGKEIQRGRAFVLRADEFDMEDSESDDDDHVDRALVVTDSGKRFTCDELYLSVSDDDS
DIASGFEVRPYLMDELGEVEGALLELTHEHQLRVKDEIRNKISALETALVNETQNSTSSF
LRVEKYKETRLDLDKKFDTQYQRRIAEALDNHLTAVQRDRELRSQIEERKIRSDAAYEEA
KRKVAFEKQQQEKAKAEAEAKLRAEEAKREAESKAAMEAKKQAAIEAEKSAAVEAERRAE
KEATETSKRVTSGGTQQATAHPTGTASSLSNAETKESGNLYRAAANALNLEQWRLQKLKE
LCEGNQMIRSSYNEDCTRHEGRISRNIRQIRGISDNVRSKASELTKLLSHPQSFQSISIE
IFAKKVVAYCANPANVPFASAYVIVLVTSQVPHAMDILLAELHRACIYTVPKHLVYKKSA
YQSKEAYFRSIGYREDDGKMESTEDYLKRLESYMKMYGALVQTEITNCQNFHGLKEGWAW
LARFLNTHPANQYTAVSLNAFLQMAGFALYNRYKSQFLKMLNVVSENFLVDLKSQNIPEL
ARTVTEIQTYIDDKKFLQEPEGRSLQSDLLSTKILQEADRWIPKPSFNNYY
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgtcaaattgaatcttcgttgttcttcgcaacgagtcgatggcgttgccgct
gaacccgaacctgattggaccttcgacgatcttgtttcggaactcaacgctttggagact
aagctcgccactaatgcttcttcttccacccaacgttcttcacctctcgataaatcaata
tcgaagtgtgggaaagaaatccagagaggtagggctttcgtgttgcgtgccgacgagttt
gacatggaggactcagagagcgacgatgatgatcatgttgacagggctttggtagtaact
gacagtggcaaacggttcacctgtgatgaactttatctgagtgtcagtgatgatgattct
gacattgcctctggttttgaagtgagaccctacttgatggatgaattgggagaggtcgaa
ggtgccttgttggagttgacacatgaacatcagcttagggttaaggatgaaataaggaac
aagatctcggcattggagacagctctggtgaatgaaactcagaattctacttcttccttt
cttcgggttgagaaatataaagaaacaaggctggacttggataaaaagtttgacactcaa
tatcagcgtcggattgcagaagcacttgataatcacttgacagctgttcaacgggaccgt
gaacttagatcacaaatagaagaaaggaaaataagaagtgatgcagcttatgaagaggcc
aagagaaaggttgcttttgaaaagcagcagcaagaaaaggctaaagctgaagcagaggcc
aaacttagagctgaggaagcaaaacgagaagctgagagcaaagcagcaatggaggccaag
aaacaggcagcaattgaagctgaaaaaagcgcagcagtagaagctgaaagaagagcagaa
aaggaagctactgaaacttccaaaagagttacttctggagggacccaacaagctactgcc
catccaacaggtactgcatcaagcctatccaatgctgaaaccaaggaatctggtaattta
tatcgagctgcagcaaatgctttgaatttagaacagtggagactgcagaaactgaaagag
ctatgtgaggggaaccaaatgataagatcaagttataatgaggattgtacccgccacgag
ggtcgcatttcccggaatataagacaaataaggggcataagtgacaatgttaggtcaaaa
gcaagtgaactcactaaacttttgagtcatcctcaatcttttcaatcaatcagcattgag
atatttgctaaaaaggttgttgcatactgtgcaaaccccgctaatgtgccctttgcaagt
gcctatgtcattgttcttgttacatctcaggtcccacatgctatggatattttactagct
gagcttcacagggcttgcatatatactgtcccaaagcacctggtttacaagaagtctgcc
tatcaatcaaaagaggcatacttcagaagtattggctatcgagaagatgatggaaagatg
gagagtacggaagattatttaaagcggttagaatcatacatgaagatgtatggtgcactg
gttcagactgaaattacaaactgtcaaaattttcacggcttgaaagaaggttgggcatgg
cttgcaaggttcttgaatacacacccagcaaatcaatacacagctgtttcgcttaatgca
ttcttgcaaatggctggatttgctctctataacagatataaatctcaattcttaaagatg
ctgaacgtcgtctctgagaactttttagttgatctgaaatcacagaatataccagaattg
gcgaggacagttacggagatacagacttacatagacgataagaagttccttcaagagcca
gaaggaagaagcctgcagtctgatttgttatcaaccaagatacttcaagaggcagacaga
tggataccgaagcctagttttaataattattattga
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