Glycine soja (wild soybean): 114382118
Help
Entry
114382118 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52C-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114382118
03041 Spliceosome [BR:
gsj03041
]
114382118
03036 Chromosome and associated proteins [BR:
gsj03036
]
114382118
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114382118
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114382118
mRNA cycle factors
Common to processing body (P body) and stress granule
114382118
Spliceosome [BR:
gsj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114382118
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114382118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
PRC2_EED_ins
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
114382118
NCBI-ProteinID:
XP_028197158
LinkDB
All DBs
Position
13:complement(31363710..31372254)
Genome browser
AA seq
602 aa
AA seq
DB search
MRTSWADLAANSAPENAGTSNSTAPSRPVYVPPHLRNRGPSESPAPPPTSNNNNNNNNNN
NNNNNNNNAGSRWGALPARNGWGNRSCGSWDRREVNPFGDQEEAAAAFGGEEQQENTGIN
FDAYEDIPVETSGENVPPAVNTFAEIDLGDALSQNIRRCKYVKPTPVQRHAIPISLAGRD
LMACAQTGSGKTAAFCFPIINGIMRGQAQPLQRPPRGVRIVYPLALVLSPTRELSMQIHE
EARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYL
ALDEADRMLDMGFEPQIRKIVEQMDMPPAGARQTMLFSATFPKEIQRLASDFLSNYIFLA
VGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQKANGVQGKQALTLVFVETKKGADSLE
HWLCRNSFPATTIHGDRTQQERELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDL
PNDIDDYVHRIGRTGRAGKKGLATAFFNDNNASLARALADLMQEANQEVPDWLSRYAARS
SFGGGRNRRSGGSRFGGRDFRREGSFSRGGSDYYSAGNNSSGYGNSGVYGAGYGPGVTSA
WD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcatgggctgatttggctgccaattcggcgcctgaaaatgcgggaacctct
aactccacagctccttcgcggccggtttatgtgcctccgcatctgagaaaccgtggacca
tcggaatcccctgctccaccacctacatcaaataataataataataataataataataat
aataataataataataataataatgcgggatcacggtggggtgctctgccagccagaaac
ggatggggcaacagaagttgtggtagttgggatcggcgcgaagtgaatcccttcggggat
caggaggaggcagcagcagcgtttggcggcgaggagcagcaggaaaacacgggaattaac
ttcgatgcgtatgaggacattccggtggagacgagcggtgaaaacgtgcccccggctgtg
aatacttttgcggagattgacttgggcgacgcgcttagtcagaacattagacgctgcaaa
tatgtgaagccaacgccggttcagcggcatgccataccgatatcccttgcgggacgggat
ttgatggcttgtgcgcagactggttccggaaagactgcagcattctgtttcccaatcatc
aatgggattatgagaggccaagcccaacccctccagaggccccctcgcggcgtccgcata
gtctacccacttgcccttgttctctcaccaactagggagctatccatgcagatacatgaa
gaggctagaaagttttcataccagacaggggttagggtcgttgttgcttatggtggagct
ccaattaatcagcagctccgggaacttgagagaggggtggatatccttgttgcaactcca
ggaagattggtagatttactggagagagctagagtttcattgcagatgatcagatatttg
gccttagatgaggcagatagaatgctggatatgggttttgagccacaaataaggaagatt
gtagaacaaatggacatgcccccagcaggtgccagacagactatgctgttcagtgctaca
tttccaaaagagatacagagacttgcctctgatttcctttcaaattatatttttctggct
gttggaagagtgggctcaagtactgatttaattgtccaaagagttgagtatgttcaagag
tctgacaagagaagtcacctcatggatcttcttcatgcacagaaggcaaacggtgtacaa
ggaaagcaagctttgactttagtttttgtggagacaaagaagggagctgattctctagag
cactggttgtgccgtaatagttttccagcaactactattcatggtgacaggacacaacag
gaaagagaattggcattaaggtcatttaaaagtggcaacacccccatattggttgcaact
gatgtggctgcacgtggtcttgatattcctcatgttgcccatgtggttaactttgacctt
cctaatgatattgatgattatgtacaccgaattggaaggacagggcgagcaggaaagaaa
ggcctggcaactgcattctttaatgacaacaatgcatccctagcaagggctttagcagat
ctgatgcaagaagcaaatcaagaagtgcctgattggctctcacggtatgctgctcgctct
tcctttggtggtggaaggaaccgtcgatcaggaggaagccgttttggtggccgtgacttt
cgaagagagggttcttttagtaggggtggttctgattactacagtgcaggaaacaacagt
agtggatatggcaattctggtgtgtatggtgcaggatacggtcctggggtaaccagtgct
tgggactga
DBGET
integrated database retrieval system
