Glycine soja (wild soybean): 114382145
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Entry
114382145 CDS
T06057
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114382145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114382145
03036 Chromosome and associated proteins [BR:
gsj03036
]
114382145
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114382145
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114382145
PBAF complex
114382145
GBAF(ncBAF) complex
114382145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
114382145
NCBI-ProteinID:
XP_028197181
LinkDB
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Position
13:10150357..10156249
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AA seq
765 aa
AA seq
DB search
MSPSPSFPSENRTKWRKKRKRESYKRNQKRHGGDEDDSDDDNEPDDNDDSDDQFRSPSAQ
FADPQRVEIEVVSPDGVQISRFPPAIRRAVTRPHAAVTAIAALEAGGDKSQHSSIPVLEN
VSHGQLQALSAVSADFFVIAPPSVLKGSGVVKRFGSRVLVVPMHSDWFSPASVHRLERQA
VPHFFSGKSPDHTPEKYMECRNYIVARYMEDPGKRITVSSCQGLSVGVGNEDLTRIVRFL
DHWGIINYCAPGPSHENSDNETYLKEDTSGAICVPSAGLRSIDSLVKFDKPKCKFKADEI
YSSRTMHNTDISDLDERIREHLSENYCHYCSCSLPVVYYQSQKEVDILLCTDCFHDGRFV
TGHSSIDFIRVDSTTDFGDLDGDSWTDQETLLLLEAVEVYNENWNEIAEHVGTKSKAQCI
LHFLRLPVEDGKLENINVSSLSLSSIVKNQEDNGRLHCCSNGDSAGPVHNSQDSDGRLPF
ANSGNPVMALVAFLASAVGPRVAATCAHAALAALSRNNSGSTSHIEAPDNDNRTNSESVH
NRDGGHDGEVANSNQKNEDKSKVLGSCGQNEGGSTLLSAEKIKDAAKEGLSAAAMKAKLF
ADHEEREIQRLCANIVNNKLKRLELKLKQFAEIETQLMRECEQVEKVKQRLASDRSHIVS
TRLGNGGTTPPMNVAGAGPSMVNNNSNGRQQMISASSSQPSISGYGNSQPVHPHMSFVPR
PSMFGLGQRLPLSMIQQQHSASSDPMFNGPGNLQPTPNHSVSRPV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccttccccttcttttccttcagagaacagaacaaaatggaggaagaagcgaaag
agagaatcctacaaacgcaaccagaagcgtcacggcggcgacgaagacgactccgacgac
gacaacgagcccgacgacaacgacgactccgacgaccaattccgcagccctagcgcccaa
ttcgcggacccgcagcgcgtggagatcgaggtcgtgtcgcccgacggggtccagatttcg
cggttcccgccggcgatcaggcgcgccgtgacccgcccccatgcggcggtcacggcaatc
gctgcgctggaggccggcggcgacaaatcgcaacacagcagcattccggttctggagaat
gtgtcgcacggccagctccaggcgctgtcggcggtgtccgccgatttcttcgtcattgct
ccgccgtccgttttgaaaggctccggcgtcgttaagcggttcgggagtagggttcttgtt
gttcctatgcattcagattggttttctccagcctcagtgcatcgtcttgagagacaagca
gtgcctcatttcttctcaggaaagtcgccagatcatacgccagagaagtacatggagtgt
aggaactacattgttgcaagatacatggaggacccagggaagaggattacagtctctagt
tgccagggattgtcagttggtgttggtaatgaagatttaactcgaattgttaggttcctt
gatcactggggaattatcaattactgtgctccgggtccaagtcatgagaattcggacaat
gagacttacctgaaggaggacacaagtggtgcaatatgtgtgccatcagcaggtttaaga
tccattgatagtttggtcaaatttgacaagcccaagtgtaaattcaaagcagatgaaatt
tattcatctcgaacaatgcacaatactgatatttctgatttggatgaaagaataagagag
catctatctgaaaactattgccattattgttcttgttctcttcctgttgtgtactaccaa
tcacaaaaggaggttgatattttactctgcactgattgctttcatgatgggagatttgtc
actggtcattctagtatagattttataagggtggattcaactacagattttggtgatcta
gatggggatagttggactgatcaagagactttgctgctgcttgaagcagtggaggtttac
aatgagaattggaatgaaattgctgagcatgttggcaccaagtcgaaagcacaatgcatt
cttcattttctccgtttacctgtagaagatggaaagttggaaaatatcaatgtttcaagt
ttgtctttgtcatccattgtgaagaatcaagaggataatggaagattgcattgttgctca
aatggggattctgcaggacctgtacataacagccaagattctgatggcaggcttcctttt
gcaaattctggaaatccagttatggcactggttgcctttttagcctctgctgttggacca
agagttgctgcaacttgtgctcatgcagcattagctgcattgtcaaggaataattccggg
agcacgtcacatatagaagcaccggataatgataataggacaaattcagaaagcgtgcat
aatagagatggtggccatgatggagaggttgcaaattcaaatcagaaaaatgaggacaag
tcaaaagtacttggttcatgtggtcaaaatgagggagggtcaaccctgctatctgctgag
aaaatcaaagatgctgccaaagaaggcctctctgctgcagcaatgaaagctaaattgttt
gctgatcatgaagagcgagaaattcagaggctatgtgccaatattgttaataataagttg
aaaagattggaactgaagctgaagcagtttgcagaaattgaaacacagttgatgagagaa
tgtgaacaagttgagaaggtgaagcagaggttggcttctgatcggtcccatattgtatca
acacgtcttggaaatggtggaaccactccgccaatgaatgttgcaggtgctggtccatcc
atggttaacaacaacagcaatggtaggcaacaaatgatttctgcttcttcctcacaacct
agcatctcaggatatggcaatagccaaccagttcatccacatatgtccttcgtcccacgg
ccttcaatgtttgggttggggcaaaggctgccactttctatgattcaacaacaacattca
gcttcttcagatccgatgttcaatggccccggtaatttgcagcctactcccaatcattca
gtgtcgaggccggtgtga
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