Glycine soja (wild soybean): 114382203
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Entry
114382203 CDS
T06057
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114382203
Transcription machinery [BR:
gsj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
114382203
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_11
SCA7
GerE
Motif
Other DBs
NCBI-GeneID:
114382203
NCBI-ProteinID:
XP_028197266
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Position
13:13135728..13141996
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AA seq
512 aa
AA seq
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MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA
KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDID
SKIERVLRRRKKVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKR
NVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKED
LKEVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASG
PRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERV
RVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYI
NGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNL
NISREIVRKHEVKALMKLKHPARLDYLRRYVV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggagttattactgtttctacctcagctgctaggactccattaagattgaatacaagg
ttgatcagtcatcagcaggtgcataaacgacccataattttagcttttaaaggaaataaa
tcgaataaaaccactttggtttcacctcaggagaaaattcctctacccctagaaacagcg
aagaaacaccagaaaagagtaggaaagactagtgagtcactgaagagagtgagagccgtc
tctactgttgaaacctctccatgcaccttggatgtggactacaatgaagctgcagccaaa
cttgaaaatatatataaactcagccctgtatctgatacctgtaatgtggaagatatagat
agtaaaatcgagagagtcttgcggaggaggaagaaggttagtgaggaacgtgatgatgga
aattgtgataatgtggttagaaaccagaataagaaggccaaacgattgagtcttgataag
aggattgcattgaaaaataatgcaaaggaggaggtgattgatcaaactcagaagaaaagg
aatgttaagaatagagtacaaaatattgatgtgcttatcagggattattcagcatcaact
gatttagttagcatggactggaagaaaatgaagattccgccagttcttccttcttcagaa
catgcatggttgttcaagttgatgcagccaatgaaggcactcctacaagcaaaagaagat
ttaaaggaagtggataaagaaattacaggtggtgaactagctgatgcaacaaacatgagt
attattcaagtaaggaaagctatagaggttggtcgagctgcgagaaacaaactcataaag
cacaatctccggcttgtattgttcgtgatcaacaaatattttcaagattttgcaagtggc
ccgaggtttcaagatctttgtcaggcaggagttaagggacttatcacagcaattgatcgt
tttgagccaaaaagaagacttcagctatctacatacagtttattttggataagacattct
atcgttcgttccataaccctctcaagcttcacacgtgttccttttggacttgaaagggtt
agagtagatatccaaagaacaaaacttaagttaacatttgagctccagaggtcaccaacg
gaagaagagttagtagaaagaattgggatctcacttgaaagatatcatgaagtaatgaag
gcatcaaaacccattttatcccttcattcaagacatataaccacgcaagaggagtatatt
aatgggattactgatgttgatggtgttaatggtgataataggaggcaacttgctgttcta
agacttgctcttgatgatgtgcttgattccctgaagccaaaggagagcctagtgatcagg
cagagatatggacttgatggcaagggtgacagaacattgggagaaattgctgggaacttg
aatatttctagggaaattgtccggaagcatgaagtcaaagctctcatgaagcttaagcat
ccagctcggttggattatcttcgtcgttatgttgtataa
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