Glycine soja (wild soybean): 114382439
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Entry
114382439 CDS
T06057
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114382439
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsj04812
]
114382439
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
114382439
Cytoskeleton proteins [BR:
gsj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
114382439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
Adaptin_N
HEAT_Maestro
PDS5
Cnd1
UTP20
INTS1_R4
MMS19_C
MMS19_N
HEAT_DAAF5
V-ATPase_H_N
Npa1
Dopey_N
Tra1_ring
API5
Motif
Other DBs
NCBI-GeneID:
114382439
NCBI-ProteinID:
XP_028197658
LinkDB
All DBs
Position
13:24283176..24302648
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AA seq
1428 aa
AA seq
DB search
MEEALELARAKDAKERMAGVERLHEVLEASRRSLSSGEVTSLVDCCLDLLKDSSFKVSQG
ALQALDSAAVRAGDHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSFAWTSKSWRVREEFARTVTSAIGLFSSTELPLQRAILPAILQLLNDLNPAVRETAI
LCIEEMYTQAGSQFRDELQRHNLPSSLVKAINARLEGIQPKVHSSDGISSGYNAGEIKPV
GVNPKKSSPKAKSSSRETSLFGGEGDATEKVIDPIKVYSEKELIREIDKIASTLVPEKDW
SIRIAAMQRIESLVLGGAADYPCFFGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKD
FLGDFEACAELLIPVLLKLVVITVLVIAESADNCIKTMLRNCKAARVLPRIADCAKNDRN
AVLRARCCDYALLILEHWPDAAEVQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKT
WPERSRRLFSSFDPAIQRLINEEDGGMHRRHASPSVRDRGALMPITSQASAPSNLTGYGT
SAIIAMDRSSSLSSGTSIASGVLSQAKSLGKVTERSLESVLHASKQKVTAIESMLRGLDL
SDKHGSSALRSSSLGLGVDPPSSRDPPFPAAVTASNHLTSSLTAESTAAGANKASNRHGG
LGLSDIITQIQASKDSGRLSYNTNVGIEPLSAFSSFSSKRATEKLQERGSIDENSDMRET
RRYMNPNIDRQYMDTHYRDGNYRDSQNSYVPNFQRPLLRKNVAGRVSAGSRRSFDDSQLS
LGEMSNYADGPASLHEALSEGLSSGSDWSARVAAFNYLHSLFEQGQKGIQEVVQNFEKVM
KLFFQHLDDPHHKVAQAALSTLADIILACRKPFEGYMERMLPHVFSRLIDPKELVRQACS
MNLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFDKHAMNPEGTANIGILK
LWLAKLVPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRT
PRIEVDLMNYLQNKKDRRSKSSYDPSDVVGASSEEGYAGLSRKAQYIGRYSAGSLDSDGG
RNWSSQDSTLIKASLGQAATDETEEHTDSNSGAFGLKTKELAYPANSTGQNFGLQTSHGH
VDSSINFEGLSSDLNVNGLMSSEHLNITEDFGHDKEHHSAEDVKVNYMTDNGPSIPQILH
MICSGGDGSPISSKRTALQQLAEVSIANDHSVWTLYFNQILTVVLEVLDDSDSSIRELAL
SLIVEMLKNQKDAMENSVEIVVEKLLNVTKDIVPKVSNDAEHCLTIVLSQNDPFRCLSVI
VPLLVTEDEKTLITCINCLTKLVGRLPQEELMAQLPSFLPALFEAFGNQSADVRKTVVFC
LVDIYIMLGKAFLPYLEGLNSTQLKLVTIYANRISQARTGKSIDTTHD
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcgctcgagctcgcgcgcgcaaaggacgcgaaggagcgcatggcgggcgtg
gagcgcctacacgaggttctggaagcttccagaaggagcctcagctccggcgaggtcacc
tcgctcgtcgattgctgcttggatctcttgaaggacagcagcttcaaggtctcgcagggc
gcgctccaggcgctcgactccgccgccgtgcgcgccggcgaccacttcaagctccacttc
aacgcgctcgtccccgccgtcgtcgaccgcctcggcgacgccaagcagcccgtccgcgac
gccgcgaggcggctccttctcactctcatggaggtttcatctcctacaataattgttgaa
agagcagggtcctttgcatggacaagcaaaagctggagagtcagagaggaatttgcgcga
acagtcacatctgcaattggtctattttcatctactgagcttccccttcaacgtgctatt
cttcctgctattttgcagttgctgaatgatctgaatcctgctgttagggaaacagctatt
ttgtgtattgaggaaatgtatacacaagctgggtcccaatttcgtgatgaacttcagcgc
cacaatctcccttcatctttggtgaaagctattaatgccaggctagagggaattcaacca
aaagttcactcttcagatggtatttctagtggttataatgctggggaaattaagcctgtg
ggtgttaatcccaagaaaagtagtccaaaggctaaaagttcatcaagggagacctctctt
tttggaggagaaggtgatgccactgagaaagtcatagaccccatcaaggtgtattcagag
aaggagttaatcagagaaattgataagattgcttctactcttgtaccagaaaaggactgg
tcaattcgtattgctgccatgcaaagaattgaaagtcttgttttgggaggtgctgctgat
tatccatgtttctttggactcctgaagcagcttgttggacctttaagcacacaattgtca
gatcgaaggtctagcattgtgaagcaggcttgccatttattatgctttttgtcgaaggac
tttttgggtgattttgaagcatgtgctgaattgttgataccggtccttctgaagctggtt
gtgattactgtgcttgtaattgcggaatctgcagataactgcataaaaacgatgttgcgc
aactgcaaagcagctcgtgtacttcctcggatagctgattgtgccaaaaatgatcgtaat
gctgttcttcgtgcaaggtgttgtgattatgctcttttgatactagaacattggcctgat
gcagcagaagtacaacgatcggctgatctatatgaggatatgataaggtgttgtgtttca
gacgcaatgagtgaggtgcggtcgactgcaaggatgtgttacagaatgtttgcaaagact
tggccagaacgttcccgtcgcctgttttcatcatttgaccctgctattcaaaggttaata
aacgaagaggatggaggaatgcataggcgacatgcatcaccgtctgttcgtgatagaggt
gcactgatgccaataactagtcaagcttcagcaccctctaatttaactggttatggaact
tctgctattattgcaatggaccgaagttcaagtttatcatcggggacttctatcgcctct
ggtgttctttcacaagccaagtcacttggtaaagttactgaacgtagtttggaaagtgtg
ttgcatgcaagcaaacagaaggtcactgctattgaaagcatgcttaggggtttggatttg
tctgataagcatggttcatctgctctccggtcatcgagcttgggtctaggagttgaccct
ccctcatctcgtgatccaccattccctgctgctgtcacagcatctaatcatctgactagc
tctttaacggcagaatcaactgcagctggtgccaataaagctagtaaccgacatggtggt
ttgggtttgtctgacataatcacccaaattcaagcttccaaagattctggcaggttatcg
tataatactaatgttggtattgagcctttatcagcattctcatcattctcaagtaaaagg
gctactgaaaaattgcaagaaagaggttctattgatgaaaacagtgatatgagggagact
agacgctatatgaaccccaacatagataggcagtatatggatacccattatagagatggc
aactatagggattcacagaatagttatgtgcctaatttccagaggccactattgagaaag
aatgtagctggacgtgtgtctgctggaagcaggaggagttttgatgatagccaattatct
cttggagagatgtcaaattatgcagatggcccagcatctcttcatgaagctctgagtgaa
ggacttagctcaggttctgactggtccgctagggttgctgcctttaattatcttcactct
ttgtttgagcaaggtcaaaagggaattcaagaagtagtccagaattttgaaaaggtaatg
aagttgttttttcagcacttggatgatccccatcataaagttgcacaggctgctctctcc
acacttgcagatattattctggcatgccgaaagccctttgaaggttacatggaacgaatg
ttaccccatgtgttttctcggttaattgaccccaaagagctagttagacaagcatgctca
atgaatttggaagttgttagcaaaacatacagcatagattctctcctacctgcattgcta
cgatctctagatgaacaaaggtcaccaaaggcaaaattggctgttattgagtttgcaata
agttcatttgataagcatgccatgaatcctgaaggtactgctaatattggcatcctaaaa
ttatggcttgccaagctagtcccattggttcatgataaaaatacaaaacttaaagaagca
gctattacatgcattatatcggtgtactctcactttgattcatctgcagttttgaatttt
attcttagtttgtcagttgatgaacaaaattctttgaggcgagcccttaaacagcgcacc
cctcgcattgaagtagacttaatgaattatctgcaaaataagaaagatcgccgttctaag
tcttcctatgatccatctgatgttgtgggagcatcctctgaagagggatatgctggtttg
tcaaggaaagctcagtacattggaaggtattctgctggttcactagatagtgatggtggc
aggaattggagttcccaagattccaccctgattaaagccagtcttggccaagcagctact
gatgaaactgaagaacatactgattctaatagtggtgcttttggtttaaaaactaaagag
cttgcttacccagccaattcaacgggtcaaaactttggcttacaaactagccatggacat
gtggacagtagcattaattttgaaggtctatcatctgatctgaatgttaatggtctgatg
tcatcagaacatttaaatattactgaagactttggacatgacaaagaacatcattcagct
gaagatgtgaaagtaaactacatgacagacaatgggcctagtattccccagattcttcat
atgatatgcagtgggggtgatggaagccctatttcaagcaagcggactgctcttcaacag
ctagctgaagtgtctatagccaatgatcattctgtttggaccctgtacttcaatcagatt
ttgacagttgtgcttgaggtgctggatgattcagattcctcaatcagagagcttgctctg
tctctgatagttgaaatgctgaaaaaccagaaagatgctatggaaaattcagttgagatt
gtagttgaaaagctgcttaatgttaccaaggatattgttcccaaggtttcaaatgatgca
gagcactgcctcaccattgttttatctcagaatgatccgttcagatgcttaagtgttatt
gtccctctactggttactgaggatgagaaaactcttatcacttgcataaattgcttgaca
aagcttgtggggaggctccctcaggaggaactgatggctcagttaccctctttcctgcct
gctttgtttgaagcttttggaaaccagagtgctgatgttcgcaagaccgttgttttctgt
ctagtggatatttatatcatgcttgggaaagcatttttgccatatttggaaggacttaac
agcacacagttgaagttggtcaccatttatgcaaatcgtatctcacaggcaaggacagga
aaatcaattgataccacacacgattag
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integrated database retrieval system