Glycine soja (wild soybean): 114382504
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Entry
114382504 CDS
T06057
Name
(RefSeq) small RNA degrading nuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114382504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114382504
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
RNases
114382504
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
114382504
NCBI-ProteinID:
XP_028197773
LinkDB
All DBs
Position
13:complement(11606422..11617546)
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AA seq
583 aa
AA seq
DB search
MFQVVAAERMGSSEAENEALRGAEEEEGSTSNKKCGKFYDVYGPEGKADIVFNSPEDNST
LNLSDVQGLVTWVLSEGFMPSWVFIKNKPLIPKVVMLYVPGLDAALFLSQSKMLPRLKKF
CGKPRALLALSCVSDGMQTIDALLTCKMKRKRDENSSIMGKFARTSQQEEGCCDTDSLSF
KELTKDIPFPVTYYTLTEKELEENGYSVNKPGFLSTLPAPSGSPFYEMLALDCEMCITSE
GFELTRITLVDVKGQVLIDKLVKPSNAITDYNTRFSGITSEMLDGVTTSLRDIQEEFIKL
VYKETILVGHSLENDLLALNISHDSVIDTAVLYKHPRGSSHKNALRFLTKRFLSREIQQS
GNGHDSIEDARATMELALLKIRNGPDFGSPPSFTRKKLLSILSESGKISSLIDDISVVKR
YASESSHAIPVTSDDVALAKANKEVKNEKVHFIWTQFSELHSYLKKQAEDSESLNKRLAE
MIAIKTCQNNFAKGKGFKLNASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAI
VRRLRKMLTEQNESNLCREEIVEILEEVQARAEVALCFVGVKH
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagtagtagccgcagagagaatgggttcctcggaagccgaaaacgaggctctc
cgtggcgccgaagaagaagagggttctacttctaacaagaaatgcggcaagttctacgat
gtttatggacccgaaggcaaggcagacattgtttttaactcaccagaagataattcaact
ctcaatcttagtgatgttcaaggacttgtaacttgggtgctcagtgaaggatttatgccg
tcatgggtttttattaagaataaacctcttattcccaaagtggttatgctctatgtgcca
ggcctggatgcagctttgttcttgtcacagtctaaaatgcttccaagattaaaaaaattc
tgtggcaaaccaagggcactcctagctcttagctgtgtgtcagatggtatgcagacgata
gatgcactcctaacatgcaagatgaaaaggaaaagggacgagaatagttcaattatgggg
aaatttgctcggacatctcaacaagaagaaggttgttgtgatacagacagtctatcattt
aaggagcttacaaaagacatacctttccctgttacatactatacactaacagagaaagag
ttggaagagaatggatattctgttaataagccaggttttctttctactttgcccgctcct
tcaggatctcctttttatgagatgttggcacttgattgtgagatgtgcataacaagtgaa
ggttttgagctgacaagaattactctagtagatgtcaaaggacaggttttgatagataaa
ttggttaaaccatcaaatgccatcactgattacaacacaagatttagtggaataacgtct
gagatgttagatggcgtgacaacaagtctgagagacattcaggaagagttcataaagttg
gtttacaaggagactatccttgttgggcattctctggaaaacgatttgttagcattgaat
atatctcatgactcggtcattgacacagcagtattatacaaacacccccgaggatcgtct
cataaaaatgctctacggtttcttactaagagatttctttcaagggaaatccaacagtca
gggaatggacatgacagcattgaagatgctagagctaccatggaattggcactattgaag
atcagaaatgggcctgattttggttcccctccatcctttacaaggaaaaagctcctttct
attctgagtgagtctggcaaaatttcctcactgattgatgatatatccgtagtaaaacgg
tatgcctcagagtcctctcatgcaattccagtgacctctgatgatgtagcacttgcaaag
gccaacaaggaggtgaagaatgaaaaggtacattttatctggactcagttttcagagcta
cactcgtacttgaagaaacaagctgaagattctgagagcttgaataaaagacttgcagag
atgattgcaataaaaacatgtcaaaataattttgcaaaagggaaaggcttcaagttaaat
gcatctgctgaactgaaggaaattctggctcgcatggacgctagaattcataatctgtat
ttgtcattacccacaaatgctatgatgataatttgcactggtcatggagacactgctatt
gtccgcaggctgaggaaaatgcttacggagcagaatgaaagcaatttatgtcgggaagag
attgtggaaatattggaagaggttcaggcccgagctgaagtagccttgtgttttgtaggt
gtaaaacattga
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