Glycine soja (wild soybean): 114382518
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Entry
114382518 CDS
T06057
Name
(RefSeq) nuclear pore complex protein NUP88-like
KO
K14318
nuclear pore complex protein Nup88
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114382518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114382518
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114382518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Motif
Other DBs
NCBI-GeneID:
114382518
NCBI-ProteinID:
XP_028197795
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Position
13:complement(29190003..29195655)
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AA seq
804 aa
AA seq
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MRITLEPSSEPSPSPSRSQTPKEEVEWVPLPKHPLFTAHGGATTAAASRNLLAWDGASRL
YFWDSNKRCLHRLSLRLGDPDPSSVLAASPSKVLQSDAVLDFDVRKISINRKGTAILLFG
SETLSVMYLYGRASKKDVNLICRTITIGSQTYCTGGNDIRVLQALWHPYSDTHLGILSSD
SVFRLFNLAVDPLQPEQEYYLQPVEPGRTRKASSLCPVDFSFGGDHLWDRFSVFILFSNG
AIYVLCPVVPFGSLFKCESLVEIYNDAHTFGKISANSVAANNSKLAISWLEAAFPELQNQ
ETKGDSLSLLKAHSYALFDASLVLQGPLRRVGQDGNEDSVGRSAECEGRAVSFLYNLVSK
DSILVTAWSGGQLQIDALADEIQPVWSVGSPPRLRVDSHDQILGLAMICESIASSSLWKL
DHNAWLGNPPPLLRLAIVDLALPRKAESGYNISLFIDTLMPERIYSLHDGGIDSIVLHFL
PFTSQTNGKDDTMKTPSVHPVLNTCQSGFTSEPSLCGFVSLSDSFGYSWIVTITLSLECV
VLEMKSWNLLLPVSIDMEKKPISSEGESKGRDIPTIISKELLSGPREVLVPQASPSLRSV
AADSIEGRSTLHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIINDQHSRIGDAQQKLLK
VDEKEAILQKRIDRAIQMHNSLEERLQQLRNLPCVHKKPLSRAERKFKSELDHFKEVELD
ALHSSVDAVSARLRRHLQASKANHQQQKTPGKKSYAGDDQMSLLKSSLEKLSLLNTENSK
KVELVESSLRNKERSSRESSLPMP
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcacgttggagccgagctcggagccaagcccaagcccaagccgttcccaaact
ccgaaagaagaagtcgaatgggtcccacttcccaagcaccctctcttcaccgcacacggc
ggagccaccaccgccgccgcttcccggaacctcctggcctgggacggagcctcgcgcctc
tacttctgggactcaaacaaacgctgcctccaccgcctctctctccgtctcggcgacccc
gatccctcttccgttctcgccgcttccccctctaaggtgttgcaatcggacgcggtgctc
gatttcgatgtccgcaaaatctccatcaacaggaaaggaacagcgatactccttttcggt
tccgagactctctctgttatgtacctctacggacgcgcctctaagaaggacgtgaacttg
atttgcaggactattactattggttctcagacatattgcactggtggcaatgatattcgt
gtgttacaagcattatggcacccttacagtgatactcatttgggaatcctttcttctgac
tctgttttccgacttttcaacctggctgtggatcctttgcaacctgagcaagaatattat
ttacagcctgttgagcctggtagaactagaaaggcctcatcattgtgtccagttgatttt
tcttttggaggagaccacttatgggaccggttcagtgtttttattttgttcagtaatggg
gctatctatgtactttgcccagttgttccatttggaagtctcttcaaatgtgagtctctg
gtagaaatatacaatgatgctcacacatttggaaaaatatcagccaactctgttgcggca
aataattcaaagttggccatctcctggttagaagcagcttttccggagttacagaaccaa
gaaactaaaggagacagcttgtctttgctaaaagctcattcttatgctttatttgatgca
tctcttgtcttgcagggacctctgcgaagagtaggtcaggatgggaatgaagattcagtt
ggtcgtagtgcagaatgtgaaggtcgtgctgttagttttctctacaatttagtcagcaaa
gattctattttggtgactgcctggagtggtgggcagttacagatagatgctctagccgat
gagatccaacctgtctggagtgttggtagtccacctcgtcttcgtgttgattctcatgac
caaattctcggccttgctatgatttgtgagtcaattgccagcagcagtttgtggaagctt
gatcataatgcctggttgggtaatccaccccctttgctgagactggctattgttgatttg
gctctgccacgaaaagcagaaagtggttataatatttcattgttcattgatacgcttatg
ccagaaagaatatattcccttcatgacggagggattgactcaatagttttacattttctt
ccatttacaagtcagacaaatggcaaggatgatacgatgaaaacaccatctgtgcaccct
gttctaaatacttgccagagtggattcacctcagaaccttcactttgtggctttgtgtca
ttatcagattcatttggatattcatggattgtaactattacactttctctagagtgtgtt
gtgcttgagatgaaaagctggaacctcttgcttccagtaagcattgatatggagaagaaa
cccatttcatcagagggggaatcaaaagggagagatataccaacaataattagcaaggaa
ctacttagtggacccagggaggtacttgttcctcaggcctctccaagtttacgttccgtt
gcagctgattcaattgaaggccgatcaacattacatcagtatttcaagctgtttcatgaa
acttatgtggagtatgcacataaggtgtacctggagctcaagcatcacgcacctcagttg
aagaaaatcattaatgaccaacattctcgaataggtgatgcacaacagaaacttttgaaa
gttgacgagaaagaggctatattacagaaaaggatagatcgtgcaattcaaatgcacaat
tctttggaagagcgcttgcaacaattaaggaacttaccttgcgtgcacaaaaaaccactg
tccagagcagagcgaaagtttaaatctgagcttgatcactttaaggaagttgagttggat
gctttgcattcttctgttgatgcggtaagtgcaaggctgagaaggcacttgcaagcttcg
aaagctaatcaccaacagcaaaaaacaccagggaagaaaagttatgcaggagatgatcag
atgtccttgctcaaatcatcgcttgaaaaactttcacttttaaatactgaaaattcaaag
aaagtcgaacttgtggagtcttcattgagaaacaaagaaagaagcagtagagaatcaagc
ctgcctatgccatga
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