Glycine soja (wild soybean): 114382539
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Entry
114382539 CDS
T06057
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114382539
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
114382539
REST complex
114382539
Heterochromatin formation proteins
Other heterochromatin formation proteins
114382539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
114382539
NCBI-ProteinID:
XP_028197833
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All DBs
Position
13:16763320..16773524
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AA seq
1374 aa
AA seq
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MKRARDDMYPASQFKRPFASSRADSYGQNQVPGSGGGGGGGNGGVVGGGANTSQKLTTND
ALSYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIKRVKELFKGHNNLIFGFNTF
LPKGYEITLDEDEAPPKKTVEFEEAISFVNKIKKRFQNDELVYKSFLDILNMYRKEHKDI
GEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPYIRNSLHRFNERGSMAPMIRQM
PADKAQRYRRDRLPSHDRDHDMSAERPELDDDKTMMNIHKEQRKRESRERRMRDQDEREH
DLDNNRDLNLQRFPDKKKSVKKAEGFGMYSQAFSFCEKVKEKLSSSDDYQTFLKCLHIFS
NGIIKRNDLQNLVTDLLGKHSDLMDEFNDFLERCENIDGFLAGVMSKKSLSTDAHLSRSS
KLEDKDKEHKRDMDGAKEKERYREKYMGKSIQELDLSDCKRCTPSYRLLPADYPIPTASQ
RSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRYELDMLLESVSSAAKK
AEELYNNINENKIGMETLNRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALPVIL
TRLKQKQEEWSKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVTEIKEI
KEKQQKEDDIIQSIAAGNKQPLIPHLEFEYSDVGIHEDLYKLVCYSCEELFSSKELLNKI
MRLWSTFLEPMLGVPSQSHGTERAEDRKTGHNVRNFGAPNIGGDGSPRGDSLLMNSRVPK
SDKNEADGRVTEVKNVHRTTVASNDKENGSVGGELVSRDDPLMDKGQKNVEYNDKASGFS
KQFTSDEQGAKNNVSIAIRGENSLNRTNLDVSPGRALTPSRPTDVDDSVSKSQGVNAPSV
EGCDMATPVPVANGVLSESSKVKTHDESVGPCKIEKEEGELSPNGDSEEDNIVAYGDSNV
QSMAKSKHNIERRKYQSRNGEDESCPEAGGDNDADADDEDSENVSEAGEDVSGSESAGDE
CFREDHEEEEDIEHDDVDGKAESEGEAEGICDAQAGGDGTSLPLSERFLSSVKPLTKHVS
AVSFVEEMKDSRVFYGNDDFYVFFRLHQALYERLLSAKTHSMSAEMKWKAKDASSPDPYS
RFINALYNLLDGSAENAKFEDECRAIIGNQSYVLFTLDKLIYKLVRQLQTVATDEVDNKL
LQLYEYEKSRKPGKLNDSVYHANAHVILHEENIYRLQCSSTPSRLSIQLMDNMNEKPELF
AVSIDPNFSFYLHNDFLSVFPNKKEPHGIILHRNKRQYGKLDELSAICSAMEGVKVINGL
ECKIACSSSKISYVLDTQDFFFRPRKKRRTPSGTTTSRFRRDREERFRKLLACS
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggcaagggatgatatgtatcctgcctctcaattcaaacgcccctttgcttca
tcacgtgctgattcctatggacaaaaccaagtccctggaagcggagggggaggaggaggt
ggcaatggaggtgttgttggcgggggagcaaatacttcccaaaagcttactaccaatgat
gctttatcctatttgaaggaagttaaagacatgtttcaggaccaaagagagaagtacgac
atgttccttgaggtcatgaaagatttcaaggcccaacggactgacactgccggtgtcata
aaaagggtgaaggagttattcaaagggcacaacaatttgatttttggatttaatacattc
ctgccaaaaggttatgagataacgcttgatgaggatgaggctcctccaaagaaaactgtt
gaatttgaagaagcaatcagctttgtgaacaagataaagaaacgattccaaaatgatgag
cttgtttacaaatcattcttggacattttaaatatgtaccgcaaagagcataaggacatt
ggtgaggtttatagtgaggttgctaccctttttaaggaccatcgagatttgctcgaggag
ttcactagattcttaccagatacttctgctgcaccttccacacagcatgctccatatatt
cgaaattcattgcatcgcttcaatgagcggggttctatggcccctatgatccgccaaatg
ccagctgacaaggcacaacgttatcgacgagacaggcttccttctcacgatcgtgatcat
gatatgagtgctgaacgccctgagctggatgatgacaagacaatgatgaacatacacaag
gagcagaggaagcgtgaaagtagggagaggagaatgcgtgatcaagatgagagagaacat
gatcttgataacaacagggatttgaacttgcaacgctttcctgacaaaaagaaatctgtc
aagaaggctgaaggttttggcatgtatagtcaagcattcagtttctgtgagaaagttaag
gagaagttgagcagttctgatgattaccaaacgttcttgaagtgccttcatattttcagc
aatggaataattaaaaggaatgatttgcaaaatttggtaactgatttactcggaaagcat
tcggatcttatggatgaattcaatgatttcttggagcgttgtgaaaatattgatggattc
cttgctggtgtcatgagtaaaaagtcgctgtctactgatgctcatttatcaagatcatca
aaattggaggacaaggacaaagagcacaagcgcgatatggatggagctaaagagaaggaa
agatacagggagaaatacatgggaaaatcaattcaagaacttgaccttagtgactgtaaa
cgttgcactcccagctaccgacttctgcctgcagattatccaattcctacagctagtcag
agatccgagcttggtgctcaagtcttgaatgaccattgggtatctgtgacttctggaagt
gaggattactctttcaaacatatgcgcagaaatcagtatgaagagagcttgttcagatgt
gaagatgacagatatgagctggacatgttattagagtctgtgagttcagctgctaaaaaa
gcagaggaattgtataataacatcaatgaaaataaaattggcatggagactctgaaccgt
attgaagatcactttactgttctgaatttaaggtgcattgaacgtttatacggtgatcat
ggtctggatgttatagacatattgcgtaaaaacccaacccatgccctgcctgtaatattg
actcgactgaagcagaagcaagaggagtggagtaagtgtcgttcagatttcaataaagta
tgggctgaaatttatgctaaaaatcactacaaatcacttgatcatcgtagcttctacttc
aaacagcaagattcaaagaacttgagcaccaaatctttggttactgagattaaagaaatt
aaagaaaagcagcagaaagaggatgatattattcagtctattgcagctggaaataaacag
cctctaattccacatctggaatttgaatattctgatgttgggattcatgaagacctgtat
aaacttgtttgttattcatgtgaggagttattctcaagtaaggagttgttaaataaaatt
atgaggctctggagtaccttcttggagccaatgcttggtgttccttcccaatctcatgga
acagaaagggccgaggacagaaaaactgggcataatgttcgcaattttggtgcaccaaat
atcgggggtgatggaagtccccgtggagactctcttttaatgaattcaagggtaccaaaa
tctgataagaatgaagctgatggtagagtaactgaagtgaagaatgttcaccggactact
gtggcatccaatgataaagaaaatgggtctgttggtggcgaacttgttagtagagatgat
cctttaatggataaaggacagaaaaatgtagaatacaatgataaagcttctggatttagc
aaacaatttacctctgatgagcaaggagctaaaaacaatgtatcaattgcaattagagga
gaaaacagcctgaacagaactaacttagatgtgtctccaggccgtgcccttactccatcg
cgacctactgatgttgatgactctgtatccaagtctcagggtgttaatgcaccatcggtg
gagggatgtgacatggcaactccagtaccagtggccaatggtgttctaagtgagagcagt
aaagttaaaactcacgatgaatcagttgggccttgcaaaattgaaaaggaagagggtgaa
ttgtcaccaaatggtgactctgaggaggataacattgttgcttatggagattcaaatgtg
caatcaatggccaagtcaaagcacaacattgaaagaaggaaatatcagtctagaaatgga
gaggatgaatcttgtcctgaggctggaggtgacaatgatgcagatgcagatgatgaggac
agtgaaaatgtttctgaagctggtgaagatgtctcaggcagtgaatctgctggtgatgaa
tgcttccgtgaagatcatgaagaggaggaggatatagaacatgatgatgttgatggtaag
gctgagagtgaaggtgaagctgaggggatatgtgatgcacaagcaggaggagatggcaca
tctttgccattgtcagagaggttcctttcatctgtgaaacctctcacaaagcatgtatca
gcagtttcatttgtcgaagaaatgaaggactcaagggtgttctatggaaatgatgacttc
tatgtgttttttagacttcatcaagctctttatgagaggctcttatcagcaaaaacacat
tcaatgagcgcagaaatgaaatggaaagcaaaagatgctagttcaccagatccttattca
agatttatcaatgcattgtacaacttgcttgatggatctgccgaaaatgcaaagtttgaa
gatgaatgccgggcaattattgggaaccagtcatatgtgttattcacattggacaagtta
atatacaaattggtcagacagcttcaaactgtcgcaaccgatgaggtagacaataagctt
ctccaattatatgaatatgaaaagtctcgcaagcctgggaagttaaatgattctgtatat
catgcaaatgctcatgtcatccttcatgaggagaatatatatcgtttacaatgttcctct
accccctcacgactatccatccagctcatggacaatatgaatgaaaagcctgagttgttt
gccgtttccattgatccaaatttctctttttatctgcacaatgattttctgtctgtcttt
cccaacaaaaaggagccccatggcatcatactgcatagaaacaaacgccaatatggaaaa
ttagatgagctttctgcaatatgctctgccatggaaggtgttaaagtaattaatggattg
gaatgtaagatagcttgcagctcatctaagatttcttatgttcttgacacacaagatttt
ttcttccgaccaagaaagaaaagacgaacgccttcagggaccacaacctctcggttccgc
agggacagagaggaaagattccgcaaattgttggcatgctcgtaa
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