Glycine soja (wild soybean): 114382553
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Entry
114382553 CDS
T06057
Name
(RefSeq) F-box protein SKP2B-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114382553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114382553
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114382553
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GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_Zer-1
LRR_At1g61320_AtMIF1
F-box_4
PHD_5
Motif
Other DBs
NCBI-GeneID:
114382553
NCBI-ProteinID:
XP_028197859
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Position
13:11423294..11427599
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AA seq
375 aa
AA seq
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MVGKESLRTHEVLNFSFEKLMMVDCGGNSGKGVNFKAGVITEWKDIPVELLMQILSLVDD
QTVMIASEVCRGWREAICFGLTRLSLSWCSKNMNNLVLSLAPKFTKLQTLILRQDKPQLE
DNAVETISNFCHDLQILDLSKSFKLTDHSLYAIALGCQDLTKLNISGCSAFSDNALAYLA
SFCRKLKVLNLCGCVKAASDTALQAIGHYCNQLQFLNLGWCENVSDVGVMSLAYGCRDLR
TLDLCGCVLITDDSVIALANRCPHLRSLGLYFCQNITDRAMYSLAQSKVNNRMWGSMKGG
GNNDDNDDGLRTLNISQCTALTPSAVQAVCDSCPSLHTCSGRHSLIMSGCLNLTSVHCAC
AGQAHRAFTLPHAAH
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggttggcaaggagagtttgagaactcatgaggtcttgaactttagctttgagaagctt
atgatggttgactgtggtggaaatagtgggaaaggagtgaactttaaagcgggggtgatc
acagaatggaaggatattccagttgagcttttgatgcagattttgtcacttgtggatgat
caaacggttatgatagcttctgaagtttgtcgtgggtggagagaggcaatttgctttggc
ctgactcggttatcactctcatggtgtagcaagaacatgaataatttggtcctatcccta
gctcctaaattcacaaaattacagactttaatccttcgtcaagacaagcctcaactagag
gacaatgctgttgaaactatttcaaatttttgtcatgacctccaaatcttggacctcagc
aaaagtttcaagcttaccgatcattcgttgtatgccatagcccttggttgtcaggatctt
acaaaactgaacatcagtggttgttcagcctttagtgacaatgctctggcttacctggcc
agtttttgtagaaagctgaaagttttgaatctctgtggatgtgttaaagctgcatctgat
actgcgttacaggcaattgggcattactgcaatcagttacagtttttgaaccttggatgg
tgtgaaaatgtcagcgatgttggagtgatgagtttagcatatggctgccgtgatcttaga
acactcgatttatgtggttgtgtccttataacagatgacagtgtaattgccttggcaaac
agatgtcctcatctgaggtcccttggactttacttctgccaaaacatcacagacagggca
atgtattccttggcacaaagcaaagtgaacaacaggatgtggggttctatgaaaggtggt
ggaaataatgatgataatgatgatggactaagaactttgaacattagccaatgcacagca
ctcaccccttctgctgtgcaagctgtgtgtgactcatgcccttccctccacacctgttct
ggaagacactcactcatcatgagtggttgtctgaatctgacttctgtgcattgtgcttgt
gctggccaagcacaccgtgctttcactctcccacatgcagctcattga
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