Glycine soja (wild soybean): 114382975
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Entry
114382975 CDS
T06057
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03410
Base excision repair
gsj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114382975
03450 Non-homologous end-joining
114382975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114382975
Enzymes [BR:
gsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114382975
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
114382975
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
114382975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
NTP_transf_2
BRCT_2
HHH_5
PTCB-BRCT
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
114382975
NCBI-ProteinID:
XP_028198335
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All DBs
Position
2:complement(5739685..5751071)
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AA seq
534 aa
AA seq
DB search
MAPKKKPESDPHGMFSGMVVFLVPKGVQSRRFQIWKERLVQMGAVIEERFSKRVTHVFAM
HSDALLQQLDRERLSRFKGRVLLYQWLEDCLKSGEILSEDMYLLKLDSQGEHIPEKSLDP
GLTNQRTSSDLQQLLNKKSKLSTEDTKIVKNESHDDDGKEKAVFSSTSTISSHGEVDSLS
YGNTRQQHLDAENEASSLSYHPPDLNKNITEIFGKLVNIYRALGDDRRSFSYHKAIAVIE
KLPFKIESTDQINNLPSIGKSMKDHVQEIMTTGKLSKLEHFETDEKVRTISLFGEVWGIG
PSTALKLYEKGHRSLDDLRNDDSLTNAQKLGLKYFDDIGQRIPRHEAQEMEHILQKVGED
VLPGVVIICGGSYRRGKATCGDIDIIITHPDGKSHKGFLPKFVKHLKDMNFLREDLIFSS
HSEEATDSGVDTYFGFCTYPGRELRHRIDLKVYPRDIYAFGLVAWTGNDVLNRRLRLQAE
SKGFRLDDTGLFPATQGSGGKRGAKGSASLKFNTEKEIFDFLDFPCLEPHERNL
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaagaagaaacccgagtctgatcctcatggaatgttcagtggcatggtcgtg
tttttggtccccaaaggagttcaatcccgtcgattccagatttggaaggaaaggttggtg
caaatgggggctgtgatagaggagcgcttctccaaacgggtcactcatgtttttgctatg
cactcagatgcccttcttcagcaactggatagggagcgtttgtcacgttttaaagggaga
gttctcctttatcaatggttggaggactgcttgaaatcaggggagatactatcagaggat
atgtatttactgaagttggattctcaaggtgaacatatacctgagaagtctttggaccct
ggactgactaatcaaaggacttcaagcgatcttcaacaattgcttaataaaaagagcaaa
ttatctactgaggatacaaaaattgtaaaaaatgaaagccatgatgatgatggaaaagaa
aaagcggtattttcatcaacaagcacaataagcagtcatggtgaagttgacagtttaagt
tatggaaacacaagacaacaacaccttgatgctgaaaatgaggcctcatccttatcatac
catccacctgatctaaacaagaacataacagagatatttgggaaacttgtgaacatatat
agagcattgggtgatgatcggaggtcctttagctatcacaaagctattgccgtgattgaa
aagttgccattcaaaattgaaagtaccgaccagataaacaatctgccatctattggcaaa
tcaatgaaagatcatgttcaggagataatgactactgggaagttatccaaattggaacac
tttgaaactgatgagaaggtgcggacaatatcgttatttggagaagtatggggcataggc
ccatccacagcactgaaattgtatgagaagggacatcgttcgttagatgatcttaggaat
gatgactcacttacaaatgcacagaagttagggttaaaatactttgatgatatcgggcaa
cggattccacgccacgaggctcaggagatggaacacattttacagaaagttggggaggat
gttttgcctggggttgttatcatttgtgggggatcatatcgacgtgggaaagctacttgc
ggagacattgatatcattataacacatcctgatggaaaaagccacaaaggatttttgcca
aagttcgtaaagcatttaaaggatatgaatttcctgagggaggacttaattttcagtagt
cacagtgaagaggctactgattctggtgttgacacttattttggtttttgcacctatcct
ggacgggagttgcggcatcgtattgatttaaaggtgtacccaagagacatatatgctttt
ggacttgtagcttggactggaaacgatgtcttgaatagaaggttgaggctgcaagcagaa
tctaaaggattccggcttgacgatacagggctatttccagctactcagggttctggcggc
aaacggggtgcaaaaggtagtgcaagtttgaaatttaatactgaaaaggagatatttgat
ttcctagacttcccttgtcttgaaccacatgaaagaaatctctaa
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