Glycine soja (wild soybean): 114383003
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Entry
114383003 CDS
T06057
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114383003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114383003
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114383003
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
114383003
NCBI-ProteinID:
XP_028198375
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Position
14:1573756..1578512
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AA seq
313 aa
AA seq
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MANLPQSISTSGATSFGASSATAKDRSRIASVEHLVLQLNNPDLRENALHELSKKRELFQ
DLAPLLWNSFGTMSALLQEIVSIFPVISPPNLTPAQSTRVCNALALFQCVASHLDTRMQF
LHAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTKVISFLLSTEIIPLCLRS
MEMGSELSKTVATFIVQKILLDEIGLKYICTTAERFYAVAQVLGNMVETLVEQPSSRLLK
HIIRCYLRLSDNQSACKALRTCLPDMLRDATFSNCLREDPTARMWLQQLLHNIGDNRVPA
LQGGGGFDRMMGS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttgccccaatccatctccacaagcggcgcgacgtcgtttggagcttcttct
gccaccgccaaggatcgcagcaggatagcgtctgtggaacacctcgttctccaactcaac
aaccccgatctccgagaaaacgctctccatgaactctccaagaagagagagttatttcag
gatcttgctccattattgtggaattcttttggtaccatgtcagcacttttacaggaaata
gtttcaatattccctgttatttcacctccaaaccttactccagcacaatcaactcgagtg
tgcaatgctcttgctctttttcagtgtgtggcatctcaccttgatacaaggatgcaattc
ctccatgctcatatacctctatatctgtatcccttccttaatacaaccagtaagtccaga
ccatttgagtatttgaggcttaccagtcttggagtcattggtgccttagtgaaggttgat
gatacaaaagttataagtttccttctttcaacagagattattccgttgtgcctgcgcagt
atggaaatgggcagtgaattgtcaaaaactgttgcaacctttatagttcaaaaaattctg
ttggacgaaattggtttgaaatatatttgtactacagcagagcgcttttatgcagtagct
caagttttgggaaacatggtggaaactcttgttgagcaaccttcaagtcgtcttttgaag
cacattattcgttgttatcttcgtctgtcagataatcagagtgcttgcaaggcattaaga
acctgtcttccagacatgttaagagatgctacattcagtaattgccttcgtgaagaccca
acagctaggatgtggctacagcagttgcttcataatattggagacaatcgggttcctgca
ctacaaggtggaggaggattcgatcgtatgatggggtcgtga
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