Glycine soja (wild soybean): 114383235
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Entry
114383235 CDS
T06057
Name
(RefSeq) clathrin heavy chain 2
KO
K04646
clathrin heavy chain
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04142
Lysosome
gsj04144
Endocytosis
gsj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114383235
04142 Lysosome
114383235
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114383235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114383235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsj04147
]
114383235
Membrane trafficking [BR:
gsj04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
114383235
Exosome [BR:
gsj04147
]
Exosomal proteins
Proteins found in most exosomes
114383235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
114383235
NCBI-ProteinID:
XP_028198660
LinkDB
All DBs
Position
14:complement(4678377..4692279)
Genome browser
AA seq
1700 aa
AA seq
DB search
MAAANAPITMKEALTLPSIGINSQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPNQ
PLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWI
SPKMLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPTEKWLVLIGIAPGA
PERAQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSVLISFASKTLNAGQVIS
KLHVIELGAQPGRPSFTKKQADLFFPPDFADDFPVAMQISHKYNLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLEL
AVSLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGSPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSKEWALECMKDLLLANLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFR
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMVRYIEGYVQKVNPGNAPLVVGQLLDDECAE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRMLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWAKVLDPDNEYRRQLIDQVVSTALPESSSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEMAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDKIHSIDRAVEFAFRVEEDAVWSQVAKAQLRDGLVSDAIE
SFIRADDATQFLDVIRAAEDGNVYHDLVKYLLMVRGKAKEPKVDSELIYAYAKIDRLSDI
EEFILMPNVANLQNVGDRLYDEALYEAAKIIFAFISNWAKLAITLVKLQQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYGEFDNAATTIMNHSPEAWDHMQFKDVVVKVANVELYYKAVHFYLEEHPDLINDVLNVL
ALRVDHARVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGE
RELAEELLVYFIDQGKKECFASCLFVCYDLIRADIVLELAWMHNMIDFAFPYLLQFIREY
TGKVDELVKDKIEAQNEVKAKEQEEKDVVAQQNMYAQLLPLALPAPPMPGMGGFAPPPPM
GGLGMPPMPPYGMPPMGSSF
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgaatgctccgatcaccatgaaagaagccctaactttgccgagcattggc
atcaattcgcaattcatcacgtttacgcacgtgacgatggaatcggataagtatatatgt
gttcgtgaaaccgctccacagaatagcgtggttatcattgatatgaacatgccaaatcaa
cctttgaggaggcctatcaccgcggattccgctcttatgaatccgaattctagaattctt
gctttgaaagcccaactgcaaggaactactcaagatcacctgcaaatatttaacattgag
atgaaagcaaagatgaaatcatatcagatgcctgagcaggtagtcttttggaagtggatt
agccccaagatgttgggtctcgtaacacagacctctgtataccactggtcaattgaaggt
gactctgaacctgttaagatgtttgagagaacagcaaatttggcaaacaaccagataatt
aattatcgatgtgaccctacagaaaaatggttggttttgattggcattgctcctggtgca
cctgagagggcacaattggtaaagggaaacatgcaacttttctcagtggatcaacaacgt
agtcaggctcttgaagctcatgctgcatcatttgcccaatttaaagttcctgggaatgaa
aatccttctgttttgatttcttttgcctcgaagacacttaatgctggtcaagttatatcc
aagttgcatgttattgaactgggagcacaaccagggaggccatcattcacaaagaagcaa
gctgatcttttcttccccccagattttgctgatgattttccagttgccatgcagatatcc
cacaaatacaatttgatttatgtgattacgaaacttggcctactatttgtctatgatttg
gagacagctactgctgtatataggaacagaatcagtccagatcctatatttttgacctca
gaagctacatctgtgggaggcttttatgccatcaacaggagaggccaggttttattggct
actgttaatgaacaaaccattgtgaattttgtcagtggccaactaaacaatttggagcta
gcagttagtcttgccaaaagaggaaatcttcctggtgctgaaaagctggtagtggaacgt
tttcatgaactgtttgcccaaacaaaatataaggaagctgcagaacttgcagctgaatct
ccacaaggaatccttcgaactcctgacacagttgccaaatttcagagtgttcctgtgcaa
gctgggcaaactcctcctctgttgcagtattttggaacacttttaacaaggggaaagctg
aatgcctttgaatcattagaattatcacggttggttgtgaaccagaacaagaaaaatctg
ttggaaaattggttggcagaggacaagcttgaatgcagtgaggagctaggagatctcgtt
aagactgtggacaatgatcttgctttaaaaatatatatcaaagccagagctactccaaaa
gttgttgctgcgtttgctgagaggagggagtttgacaaaattctgatttactctaaacag
gttgggtacacacctgactacctcttccttctgcaaacaattctccggacagatcctcag
ggcgctgttaattttgcattaatgatgtctcaaatggagggaggtagcccagttgattac
aacacaataactgatctctttcttcagagaaatctgattcgagaggcaacagcttttctc
ctggatgttttaaagccgaatctaccagaacatgggttccttcagacaaaggtgttggag
ataaatctggtgactttccccaatgttgctgatgcaatattggctaatggcatgttcagc
cattatgaccgtcctcgtattgcccaactttgtgaaaaagctggcctttatgtgcgagct
ttgcaacattacacagaattaccagacatcaaacgcgtgattgttaatacacatgcaatt
gaacctcagtcactcgtagagttttttggtacactgtcaaaagaatgggcattagaatgc
atgaaagacttactgctggccaatcttaggggcaacctacagatcattgtgcaggttgct
aaagaatattgtgagcaattgggcgttgatgcctgcataaaactttttgagcaatttagg
tcatatgagggactgtactttttccttggatcatacttgagctccagtgaggatcctgac
attcactttaagtacattgaggcagcagcaaagactggtcaaatcaaggaggttgagcgt
gtgacaagagaatcaaatttctatgatgctgagaaaaccaaaaactttctgatggaggct
aaacttccagatgcacggcctttgattaatgtttgtgatcgttttggatttgttccagat
ctaacacactatctatacacaaacaacatggttcgctacattgaaggctatgttcagaag
gtgaacccagggaatgcacctttagttgttgggcagctgctagatgatgaatgcgcagaa
gattttatcaaaggcttgatcctttctgttcgttcattactgccagtggagccccttgtg
gaggaatgtgagaagaggaatcgacttcgtatgctcacacagttcttggaacaccttgta
agtgagggaagccaggatgtacatgttcacaatgcactgggtaaaattatcattgatagc
aacaacaacccagaacatttcctcacaaccaacccatactatgattctcgagttgtgggc
aagtattgtgagaaacgggatcccaccttagcagttgtagcttatcggcgaggacaatgt
gacgatgaacttatcaatgtcaccaacaaaaattctttgttcaaactgcaagcaagatat
gttgttgagagaatggatggtgatttgtgggctaaagttcttgatcctgataatgaatat
agaaggcaacttattgatcaggttgtatctactgctttgcctgaaagctcaagccctgag
caagtttctgcagctgttaaggctttcatgacagccgatctgccccatgaattgattgaa
cttcttgagaagattgtgcttcagaattctgcattcagtggaaactttaatttgcagaat
cttcttattttgacagcaataaaggctgatccatccagagttatggattatgttaataga
ttggataattttgatgggcccgcagttggagaaatggctgtagaagctcagttatatgag
gaagcatttgccatttttaagaagttcaacttgaatgttcaagcagtcaacgtgttgctt
gataagattcatagcattgatagagctgttgagtttgctttccgagttgaagaagatgct
gtttggagtcaggtggccaaggctcaactcagggatgggctagtaagtgatgcaattgag
tcatttatacgagctgatgatgctacacaatttttagatgttatccgtgctgctgaagat
ggcaatgtttaccatgacttggtgaaatacttgctaatggtaagagggaaagcaaaagaa
cccaaggtcgacagtgagctcatttatgcatatgcaaaaatagataggctgagtgacatt
gaggagttcattcttatgcctaatgttgctaatcttcaaaatgttggtgaccggttgtac
gatgaagcattatatgaagctgcaaaaatcatatttgcttttatatctaactgggccaag
ttggctatcacactggtcaaattacaacagtttcaaggtgctgttgatgcagcaaggaaa
gccaacagctcaaagacatggaaggaagtttgctttgcttgtgttgatgcagaggagttt
cgtttggcccaaatttgtggactaaacattattattcaggtggatgacttggaagaagtc
agtgaatattaccaaaacagaggttgcttcaatgagctcatatctctcatggagagtggt
ttagggttagaacgggcacatatgggcatctttactgagttaggagttctgtatgctaga
taccgccctgagaagcttatggagcatatcaaactattctcaacccgcctcaatattcct
aaactcataagagcttgtgatgaacaacagcattggaaagaattgacctatttgtatata
caatatggtgagtttgataatgctgcaactaccatcatgaaccattcacctgaagcatgg
gatcacatgcaattcaaagatgttgttgttaaagttgccaatgtggagttgtactacaag
gctgttcacttctacttggaagagcatccagatcttatcaatgatgttctgaacgtcctt
gcacttcgtgtggaccatgcacgtgttgttgacatcatgcggaaggctggtcacctccgt
cttgtgaaaccgtatatgattgcagttcaaagcaacaatgtatctgctgttaatgaagcg
ttgaatgagatatatgtcgaggaggaagattatgatagattgcgcgagtcaattgatttg
cacgataactttgatcaaataggccttgctcaaaagattgaaaagcatgagcttcttgag
atgagacgtgttgctgcttatatttacaagaaggcaggtaggtggaagcagtctattgct
ttgtcaaagaaggataacctttacaaagatgccatggagacagcctcccaatccggggag
cgtgaacttgctgaggagttgcttgtttatttcattgatcagggaaagaaggaatgcttt
gcctcatgtctatttgtttgctatgatctcatacgggcagacattgttcttgaactagct
tggatgcacaatatgattgactttgccttcccatatctattgcagtttattcgtgagtac
actggcaaagtcgatgaactagtgaaggacaaaattgaagcacaaaatgaagtgaaggct
aaagagcaagaagaaaaggatgtagttgcacaacagaacatgtatgctcaattgttgcct
cttgctttgcctgcaccaccaatgcctggaatgggaggctttgctcctccccctccaatg
ggtggactggggatgcccccaatgcctccttatggtatgccacccatgggcagcagtttt
tga
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integrated database retrieval system