Glycine soja (wild soybean): 114383374
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Entry
114383374 CDS
T06057
Name
(RefSeq) protein DAMAGED DNA-BINDING 2-like
KO
K10140
DNA damage-binding protein 2
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03420
Nucleotide excision repair
gsj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114383374
09124 Replication and repair
03420 Nucleotide excision repair
114383374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114383374
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114383374
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114383374
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
114383374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EIPR1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR75_1st
WD_LRWD1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
114383374
NCBI-ProteinID:
XP_028198840
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All DBs
Position
14:48264857..48270183
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AA seq
554 aa
AA seq
DB search
MAPVTRRTSFPKVLIERDSDSEQSSSEEEEILEEEEEEEEVGVSTANEKAEKLDLGSDAN
RKGKAPITISLKKVCKVCKKPGHEAGFKGATYVDCPMKPCFLCKMPGHTTLTCPHRVSTE
HGVVPAPRRKTCKPLDYVFERQLRPSLPSIKPKYVIPDQVNCAVIRYHSRRVTCLEFHPT
KNNILLSGDKKGQLGVWDFGKVYEKVVYGNIHSCLVNNMRFNPTNDCMVYSASSDGTISC
TDLETGISSSPMNLNPDGWQGPNTWKMLNGMDINSEKGLVLVADSFGFLHMVDMRSNNRS
GDAILIHKKGKVVGIHCNPIQPDIFLTCGNDHFARIWDLRQIKAGSSLYDLKHKRVVNSA
YFSPISGTKILTTSQDNRLRVWDSIFGNMDSPSREIVHSHDFNRHLTPFKAEWDPKDPSE
SLAVVGRYISENYNGAALHPIDFIDTSTGQLVAEVMDPNITTISPVNKLHPRDDILATGS
SRSLFIWKPKEKSELVEEKDERKIVVCGKAEKKRGKKNGNISDESDDEGFMSKSKKSKTK
KTESKLSRFTKDNC
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggttactcgaagaacctcgttccccaaggttctcatcgagagagactctgac
tccgaacagagttcatccgaagaagaagaaatacttgaagaagaagaagaagaagaagaa
gttggggtttctactgcaaatgagaaggccgaaaaactggacctgggttccgacgcaaac
agaaaagggaaagcccccatcactattagtctcaaaaaagtttgcaaggtgtgtaagaag
cctggtcatgaagcggggttcaagggtgccacgtatgttgattgccccatgaagccttgc
tttctgtgtaaaatgcctggacataccactttgacttgcccgcatcgcgtctctactgag
catggagttgttccagcaccccgcaggaaaacgtgtaaacctttggattatgtgtttgaa
cgccagctacgaccatcccttccttcaatcaagcccaaatatgtgatcccagaccaagtg
aattgtgctgtcatcagatatcacagcagacgggtaacatgcttggagttccaccccaca
aagaataacatcctcttatctggagataagaaagggcaacttggagtatgggattttggt
aaagtatatgagaaagtggtctatgggaacatacattcttgtttagtgaacaatatgagg
tttaatcctacaaatgattgtatggtctattctgcatcctctgatggaaccattagttgt
actgacttggagactggaatatcatcttctccaatgaacctgaatcctgatggatggcag
ggtccaaacacttggaaaatgctcaacggcatggatattaacagtgagaaaggtctcgtt
cttgttgctgatagctttggttttcttcacatggttgacatgcgctccaacaacaggagt
ggtgatgcaattttgatccacaaaaaaggaaaagttgttggtatccattgcaatccaatt
caaccagatatctttttgacttgtggaaatgatcattttgctcgtatttgggacctgcgt
caaataaaagctggatcatccctttatgatctgaagcataagcgtgttgttaactctgca
tatttctctccaatatctggaaccaaaattctcactacatcacaggacaaccgtcttcgt
gtatgggattctatctttggtaatatggactctcccagccgagaaattgtacatagtcat
gatttcaatcggcatttgacaccctttaaagctgaatgggatccaaaggatccatcagag
tcccttgctgttgttggtcgttatataagtgaaaattataatggagctgccctccatccc
attgattttatagatacaagtacagggcaattggtagctgaagtgatggacccaaacatc
acaaccatcagtcctgtgaataagttgcatccccgagatgatatcctggcaactgggagt
tctagatctctgttcatttggaagcccaaggagaagtcagagcttgtagaggagaaggat
gaacggaaaattgtggtttgtggaaaagctgagaagaaacgtggtaagaaaaatggaaat
attagcgatgaatctgacgatgaaggattcatgtccaagtccaagaagtctaagaccaaa
aagaccgagtcaaaattgtctcgcttcactaaggataattgctga
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