Glycine soja (wild soybean): 114383814
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Entry
114383814 CDS
T06057
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114383814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114383814
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114383814
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GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF6372
Cys_rich_VLP
Motif
Other DBs
NCBI-GeneID:
114383814
NCBI-ProteinID:
XP_028199351
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Position
14:12000055..12002988
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AA seq
237 aa
AA seq
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METDRPDSQTPNQLRPLACSCSCSILHRSHGSASWAQRETKVLAAVYGPKAGTKKNENPK
KASIKVIWKPKTGQIGKVEKEYEMILKRTLESICIRTIYPNTTTLVIVQIVHDDGVLLPC
AINAACVALVDARIPLKHLVVAICCSITDSGCIILDPTKDQEEKMKAFINLVFPNTIVSV
LPEGSLQEGSETMAHGIMTSITQGAMSGLGGFVACRALSQRNTDPTKASRPWDIAIL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggagactgacagacctgacagccagactcccaatcaactgagacccctggcctgctcc
tgctcctgctccatcctacatcgatcccatggctcggccagttgggctcaacgtgaaact
aaagtgcttgctgcagtttacgggcccaaagctggaaccaagaagaacgaaaaccccaaa
aaagcatccattaaagttatttggaaaccgaagactggacaaattggaaaagtggagaag
gagtatgagatgatattgaaaagaactttggaaagcatctgcattcgaacaatatatccc
aacaccaccactttggttatagtccagattgtccacgatgatggtgttcttcttccatgt
gcaataaatgcagcatgcgttgcacttgtggatgcgagaattcccctaaaacatcttgtt
gtagcaatatgttgttctataacagacagtggttgtattatattggacccaaccaaagat
caagaggagaaaatgaaagcattcatcaatttagtttttccaaatacaattgtttctgtc
ctcccagagggatcactacaggagggtagtgagactatggcacatggaatcatgacatct
attacacagggtgctatgtcaggtttgggagggtttgtggcatgcagagcactctcacaa
aggaatactgatcctaccaaagcttcacgcccttgggacattgcaatactatag
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