Glycine soja (wild soybean): 114384269
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Entry
114384269 CDS
T06057
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114384269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114384269
03036 Chromosome and associated proteins [BR:
gsj03036
]
114384269
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114384269
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114384269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
GLOD4_N
Motif
Other DBs
NCBI-GeneID:
114384269
NCBI-ProteinID:
XP_028199727
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Position
14:complement(491248..497364)
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AA seq
1022 aa
AA seq
DB search
MECDVGGVSDSCILHTCKRRRVYKGCFHPSIDIMTETEASLPILNSSGYYTKPSLKELVA
RELVEPGYCSRVPDFTVGRFGYGYVRYLNETDVRGLRIDEIVKFHRHEIVVYSDENDKPA
VGQGLNKAAEVVLVLDSEILKSKEGKEDVMVSKLKQITKRQKAQFISFDLVTGEWKFLVG
HFSRFGFGDDDEEDIAMDDAEVYDVEKESPSNTNELELSHSLPSHLRLDPVKMREMRLLM
FPDEEEVEDLSCKSSSGKQYVRPLQSSAQAINHRSTPPVARKTPFPLLEYKHGNFDSNSP
GGILMVQQHKGMPLRTIKSQGFKLDLKHETPVSGNYAHNIVDAGLFMGKSFRVGWGPNGI
LVHSGAPVGSSGNHKLLSSVVNLEKVAFDNVVRDENKKVTEELIDHALVSPLNFHKGINH
VMKEVEIGPCKLTLQKLEANRSTLSEISHHYCDLIERQLSVPGLSSTTRLGLTHQVMTWE
LIRVLFSDREQKGQVESLGADNEEDMMQDIKEICQDVDREALPLMRRAEFSYWLRESVSY
HVQNQISSLNDSDYLQHIFVLLTGRQLDEAVQLAVSKGDVRLACLLSQAGGSTVNRSDIA
RQLDIWRNKGLDFSFIEKDRLRLYELLAGNIHDALHDVKIDWRRFLGLLMWYKLPPNTSL
PIAFQTYKHFVDEGTAPYPVPLFIDEGTSEEVISWNTDNHFDISFYLMLLHANKETKFSF
LKAMFSAFSSTPDPLDYHMIWHQRAVLEAVGVINSNDLHILDMSFVSQLLCVGKCHWALY
VVLHLPLREDYLYLHVNLIREILFQYCETWSSDESQQQFIEDLGIPTDWMHEALAIYYNY
NGDHSKALDQFLQCANWQKAHAIFITSVAHRLFLQAKHAEIWRIATSMEDHKSEIENWEL
GAGIYISFYLMRNSLQDDTNAMTELDSLESKNAACQDFVSQLNESLAVWGCRLPVDARVV
YSRMAGEICDLLLSGVGEGATRDEQFNCFDTAFSAPIPEDQRSGHLQDAVYLFTSYLSEI
AT
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtgacgttggaggtgtctctgattcatgcattttgcacacttgcaagagaaga
agggtttataaaggctgctttcatccatccattgatatcatgacagaaactgaagcttcc
ctacctatcttgaactcgtccggttattataccaaaccatctttgaaggaattagtggcc
agggaactcgttgaacctggttattgcagccgtgtccctgatttcactgttggaagattt
ggttatggatatgtcaggtatctcaatgaaactgatgtcagggggttacgtatagatgaa
attgtgaagtttcataggcatgagatagttgtatacagtgatgaaaatgataagcctgct
gttggccagggccttaacaaggcagctgaagtagttttggtattagacagtgaaatattg
aagtctaaggaggggaaggaagatgttatggttagcaaattaaaacaaattacaaagaga
cagaaggcacaatttatttcctttgatctagtgactggtgagtggaaattcttagttgga
cacttcagcagatttgggtttggtgatgatgatgaggaagacattgctatggatgatgct
gaggtatatgatgttgagaaagaatcaccatcaaataccaatgaacttgaactttctcat
tctcttccttctcatcttaggcttgatcctgttaaaatgagagaaatgagattattgatg
tttcctgatgaagaagaggtagaggacttaagttgcaaatcatcttctggtaagcagtat
gtgcggcctttacaaagttctgctcaggcaatcaaccatcgatccaccccaccagttgct
agaaaaactccatttccattacttgagtataaacatgggaattttgattcaaattctcct
ggaggaattttgatggttcagcagcataagggcatgcctcttaggacgataaaatcacaa
ggttttaagctagatctcaaacatgaaactccagtatctggaaactatgctcacaatata
gttgatgctggtctgtttatgggtaagtcatttcgagttgggtggggaccaaatggcatt
cttgtacactccggtgcacccgtaggaagcagtggtaatcacaaactgttatcatctgtt
gtcaatttggagaaagttgctttcgacaatgtggtcagggatgaaaataaaaaagtgact
gaggaacttattgatcatgctttggtatctccattaaattttcacaaaggaataaaccat
gtgatgaaagaagttgaaattggtccctgcaagttgacacttcaaaagcttgaagctaat
cgttcaaccctgtctgagatttctcatcactattgtgatcttattgagcggcaattgagt
gttcctgggttatcttccactactcgtttgggtttgacacaccaagtaatgacctgggag
ttaattagagttcttttttctgacagagaacaaaaaggtcaagtagaatctttgggtgct
gacaatgaggaagatatgatgcaggatataaaggaaatttgtcaagatgttgaccgagaa
gcactccctctaatgaggagggcagagtttagttattggttgcgagagagtgtttcctat
catgttcaaaatcaaataagctctctaaatgattctgattatctgcagcatatatttgta
ctcctgactgggcggcaactagatgaagcagtgcagctggctgtgtccaaaggagatgtg
aggttggcttgtttgttaagtcaggctggtggttctactgtgaatcgctctgatattgca
aggcaacttgatatttggagaaataaaggcctggattttagtttcattgaaaaggacaga
ttgagactctatgaattgcttgcaggaaatattcatgatgcattgcatgacgtcaaaatt
gactggaggaggttcttaggtttattaatgtggtacaaattaccaccaaacacttcatta
cccattgcttttcagacttataaacattttgttgatgagggaacagctccatatcctgtt
cccctttttattgatgaaggaacatcagaggaggttatcagttggaacacggataaccac
tttgacatttcattttatttaatgcttcttcatgccaacaaagagacaaaattcagcttt
ctgaaggctatgtttagtgcattctcttctacccctgatccacttgattatcatatgatt
tggcatcaacgagcagtcttggaagctgtgggtgttatcaattctaatgatcttcatatt
ctagacatgtcatttgtgtctcagctgttgtgtgtagggaaatgtcattgggccctatat
gtggtccttcacttgccccttcgtgaagattatctatatcttcatgtaaatctgattcgg
gaaatattgttccaatactgtgaaacttggagttcagatgaatctcagcaacagttcatt
gaggatttaggcattcccacagattggatgcatgaggctttggcaatttattataattat
aatggggatcactcaaaagcccttgaccaatttcttcagtgtgcaaattggcagaaagct
catgctatttttataacttcagttgctcataggttattcttgcaagcaaaacatgctgag
atatggaggatagcaacttccatggaggaccataaatctgaaattgaaaactgggagttg
ggagctggaatttatatttcattttatttgatgaggaactcacttcaggatgataccaat
gctatgaccgaattggattctcttgaaagtaaaaatgctgcttgtcaggattttgtcagt
cagctaaatgaatccctagctgtttggggttgcagattacctgttgatgcaagggtggtg
tattcaagaatggcaggcgagatatgtgatttgctactatcaggtgtaggtgagggtgct
acccgtgatgagcagtttaactgctttgacactgctttcagtgctcccattccagaagac
caacgctctggtcacttgcaggatgcagtgtatctttttaccagctatctctcagagatt
gctacgtaa
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