Glycine soja (wild soybean): 114384540
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Entry
114384540 CDS
T06057
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114384540
Spliceosome [BR:
gsj03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
114384540
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
EFR3
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
114384540
NCBI-ProteinID:
XP_028200036
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Position
2:complement(7341030..7353382)
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AA seq
532 aa
AA seq
DB search
MAIETLVLGAGQEVGKSCVVVTINAKRIMFDCGMHMGYLDHRRYPDFTRISPSRDLNSAL
SCIIITHFHLDHVGALAYFTEVLGYNGPVYMTYPTKALAPLMLEDYRKVMVDRRGEEELF
SSDQIAECMKKVIAVDLRQTVQVEKDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNM
TPDRHLGAAQIDRLRLDLLITESTYATTIRDSRYAREREFLKAVHKCVSCGGKVLIPTFA
LGRAQELCILLEDYWERMNLKVPIYFSAGLTIQANAYYKMLIRWTRQKIKDTYSKHNAFD
FKNVQKFERSMIDAPGPCVLFATPGMLSGGFSVEVFKHWAVSENNLVSLPGYCVPGTIGH
KLMSDKHDKVDLDPNTKIDVRCQIHQLAFSPHTDSKGIMDLVNFLSPKHVILVHGEKHKM
ASLKEKIHSELGIQCYDPANNETVTIPSANYVYAETSDTFIRSCLSPNFTFQKCSSVDLC
NSTTVDRNLMPELQVEDERVAEGVLVLEKGKKAKIVHQDELLLMLEEQKHDA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgaaacgctcgtgctgggcgctggtcaagaagttggcaagagctgcgtggtg
gtaaccatcaacgccaagcgaatcatgttcgattgcggaatgcacatgggctacttggat
catcgtcgttaccctgatttcacccgcatctcccccagtagagatctcaactctgccctc
tcttgcatcatcatcactcactttcacttggatcacgttggtgctttagcttacttcact
gaagttttggggtataacggaccggtttacatgacgtacccgacaaaagctttggctcct
ttaatgttggaagactatcggaaagtgatggttgatcgccggggggaggaagagctattc
tcttctgatcaaattgctgagtgcatgaagaaagttattgctgttgatctgaggcagact
gtacaagtagagaaagacctgcagatacgtgcctattatgcaggacatgttattggagct
gcaatgttctatgcaaaagtgggagacgcagaaatggtttatacaggagactataatatg
acaccagatagacaccttggagcagctcaaattgatcgactacgacttgaccttcttata
actgaatccacatatgcgactacaatacgtgattcaagatatgctcgagagagggaattc
cttaaagctgttcataaatgtgtatcttgtggaggaaaggtgcttattccaacatttgca
cttggaagagctcaggaactatgcattttgttggaagactactgggaacgcatgaatttg
aaggttcctatctacttctcagcaggtttaacaatccaagctaatgcatattacaagatg
cttattcgttggacaaggcagaagattaaagatacatactctaaacataatgcttttgat
tttaagaatgttcaaaaatttgaaaggtctatgatagatgctcctggcccttgtgttctt
ttcgccactcctgggatgttaagcggtggattttcagttgaagtttttaagcactgggca
gtgtcagaaaataaccttgtcagtttgcctgggtattgtgtgcctggaacaataggtcat
aaattaatgtcagataagcatgacaaagttgacctggatcctaatacaaaaatagatgtg
cgttgccagattcatcagttggcttttagtcctcacacggattctaaagggataatggat
cttgtaaattttctctccccgaagcatgttatactagtgcatggcgagaagcataagatg
gcttcccttaaagaaaaaattcattctgaattggggattcaatgttatgatcctgcaaat
aatgaaactgtaaccattccttcagctaactatgtatatgcagagacctcagacactttc
attcgaagctgcttgagtccgaacttcacatttcagaagtgcagttcggtggacttatgt
aactcaactacggtagacagaaacttaatgcctgagcttcaagttgaagatgaaagggta
gcagaaggagttttggtcttggagaaaggaaaaaaggcaaagattgtacaccaggatgaa
cttttgcttatgttggaggaacagaagcacgatgcttag
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