Glycine soja (wild soybean): 114384630
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Entry
114384630 CDS
T06057
Name
(RefSeq) uncharacterized protein At3g06530-like isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114384630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114384630
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114384630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
TOR1L1_N
TAFII28
Motif
Other DBs
NCBI-GeneID:
114384630
NCBI-ProteinID:
XP_028200138
LinkDB
All DBs
Position
14:complement(1808395..1831199)
Genome browser
AA seq
2148 aa
AA seq
DB search
MASSIASQLEVIRSFAKTDSDPLKRPLTRPSILYDPKKAADISTEAIFTEALRGLEILIG
MDERFRNYKNDLFSHRTICLATELDRELMGIEQNNQLNVSIASYLKLLSGYFLHTAALQT
LEYLIRRHKIHVYNNEDLMLCALPYHDEPEFVRIVQILDTRNTKWGFLDGVKASGARLPR
MVIVQQCIRDKGILDALCNYASPTKKSGPSVPAIRFCTAVFVEVLGTVVTVDDGLVKRIL
PFVSLQPGIKEVSDHKAGSLMIIGLLGNKTALAPKLLNSLIRLVAEVARQEATELTDLHW
FRLSLITLISLVQSQNVEILPLKALEILKEIRDLAGVLLELSKEFNIEKFLLVLLDSLID
CSSSDEYCQRTLLSLIEKVPINGLVYHVVTKILSTCVKLSQKVSDSTSSMSARWAKKILF
VFNTKYPSELRDATHHFLQDNKARSKKDDSLYKVLCKMLDGNMDSSLNISDSNIWLGLYH
PKADVRCATLLDLNNSIILKTKAVASENLINIQEDILRQLDDKDLTVVQAALHVDGLPNV
IDSSKLLDALQNVLKRCTDKLLSGSADNYSLNGEVAVTCLKNAISYFSDHADYLKNVAAM
IFPLLLVLPQTQSLNLKALGLVNKINWPLYQNIVVSSFGKGTLIPGSLSSINLKTIDNMA
KNFMVHPKEHIAWFVESCSDLELSKTLFFFVLLQSLLIKPKDEDICALFECVFPILKAEW
ETSVTAGDVSLDEFKSEVLDWDCSAFFNDLLYVKLSHLNVKVMICIFWRLAQLISVLPSD
ILLHDDDKWVSKIRDLFVFFASSKLKHAFHEHLHYLAAQCRISPPRLLSKFFTEEGVPAA
VQVESLQCYAFLCSLSQDKWQIELLAEFPSVLVPLAGDNQTIRVAAMNCIDSLRTLWCHV
ERSGKKNGNNATWIHFLGDVLALMDQQKTFILSDKKFLPSLFASALSSSCPNILEPRNIL
VPQNIEKRFDQPTKIKILGFILGSTLKFSNYGKLMILSLFKGIGNALMHVPEVGPLLSSL
LEQYYDELKKSCPKLSNTETQIMCLLLESCIMSSPSGGNDLQHLLLKALRLGSMTLDDPA
CVKPCITVLNKLNNQFYMELKNEVKEHLFCELVFLWHNDNHDVQRATKEALMCIDISFST
VGHMLDLILAQKSCISSSAEEKMAKKQKFIGHQEAGYPPNDICRRVNPVYILSSLLDVLL
LKKDITNRHLLLGPLFKLLSKVFSEEWVNGAFSPVIRLSQPSSPSEANNYTVYHIQQTLL
IILEDIIISLKSMAPLNEKMINEINIKLLIECARNSTGSVTCNHVFSVLSAVTRVFAGEV
LEHMLDILEVIGQAAVTQIDSHSKHVFEDLISAIVPCWLAQTDDVEKLLKIFMDILPEIV
EHRRLSFVLYLLRTLGEGKSLASLLILLFRSLISRKAACFLYVETHALTFYTEEWEYKFA
VQICEQYTSTIWLPSLVMLLEQRGNSDVDQALFLELFIVMQFSLQKLQDPEFVFKLKSGE
DTTVIQRALGELMEHVVLLLQLVDAWKKQLNFPVILRRELKETMRAVVRNLTTVMIPAGY
FKSIIKLLHHADKNVGKKALGLLCEASRNHKNVSLKLKDNKGSRSTPSFLLLHMNETSQE
SLNKLCLEIMRVLDDSSNTSLKVAAVSALEVLAERFPSNNSIFSLCLGSVTRHIASHNLA
VTSSCLKTTAALINVLGPKSLAELPKIMDNVMKSSRRVLADMKPETIDVLSASNESHFYV
LITLEAVVDKLGGFLNPYLTNIMELLVLYPEYVSGVDVKVESRAHGIRKLLAEKIPVRLA
LPPLLKLYPASIEAGDKSLTIVFDMLGTIIGTMDRSSIVAFHGKIFDLCLVALDLRRQSP
PSVQNIDVVEKGVLNAMTVLTLKLTESMFKPLLIKSIEWAESEVDETASSGSIDRAISFY
GMVNKLTESHRSLFVPYFKHLLGSCVHHLSDGGDVKVSRVNRKKKARILDDGNIKEIGSV
SIKGWHLRALVLSSLHKCFLYDTGTLKFLDCSNFQMLLRPIVSQLVVDPPVLLNDSMNIL
SVKEVDDLLVVCIGQMAVTAGSDLLWKPLNHEVLMQTRSEKLRAKILGLRIVKYFVENLK
EEYLVFIAETIPFLGELLEDVELSVKSLAQEILQEMESLSGESLRQYL
NT seq
6447 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccatagcctcgcaattagaagttatcagatccttcgccaaaaccgactct
gaccctctcaagaggccactcactcgcccttccatcttgtatgatcccaaaaaagccgct
gacatctccaccgaggctattttcaccgaagctcttcgaggcttagagattcttattggc
atggatgagcggttcaggaactataagaacgatttgtttagccacagaacgatttgttta
gccacagagttggatagagagttgatgggaatagaacagaacaatcaacttaatgtctcc
attgcttcatacttgaaactactttctggatattttcttcatactgccgcccttcaaacg
cttgagtacttgatacgtagacacaagattcatgtatacaacaacgaggatttgatgttg
tgtgctttgccgtaccacgacgagcctgaatttgttcgaatagtacagatacttgataca
aggaatactaaatggggatttcttgatggtgtgaaagcctctggtgcacggctacctaga
atggtcatagtgcagcagtgcatccgtgataagggcatattagacgccctatgcaactat
gcatctccgacaaaaaagtctggaccttcagtgcctgcaattcgcttttgtactgctgtt
ttcgttgaagttttgggtactgttgtgactgttgatgatggtcttgtaaagaggatactt
ccttttgtgagtcttcagcctggcattaaggaggtttcagatcacaaggctggttctctg
atgatcattggtttgcttggaaacaaaactgcattagctcctaaacttttgaatagtttg
atacgtttggttgctgaggttgctcgtcaggaggctacagagttgacagatctccattgg
tttcgattgtcccttattaccttaattagtcttgttcagtctcaaaatgttgaaatactc
ccattgaaggctttggagatattaaaggaaataagggacctggcaggggttttattagaa
ttatctaaggagttcaatattgaaaagtttctccttgtgcttttggactccctgattgac
tgcagttcttctgatgaatactgtcagcggactttgctatccttaatagaaaaagtcccc
ataaatggtcttgtttatcatgtggtcaccaagatcctttcaacttgtgtgaaattatca
caaaaagttagcgactcaacttcttccatgtcagctaggtgggcaaaaaagattctgttt
gttttcaatacaaaatacccttctgaattacgagatgccactcatcatttccttcaggat
aataaagcacgttctaagaaagatgattcattgtataaggttttatgtaagatgttggat
gggaatatggattcttcacttaatatttcagactcaaatatttggttgggcctgtatcat
ccaaaggctgatgttcgatgtgctacgctgcttgatttaaataattccattatcctcaaa
accaaggcagttgcttcagagaatcttataaacatccaagaggacatattaagacagctt
gatgataaagatctaacagttgttcaagcagctttacatgttgatggcttgccaaatgta
atagattcttctaagcttcttgatgcactacagaatgtgctaaaaagatgcactgacaaa
ctgctgtcaggttcagctgataactatagtctaaatggtgaagttgctgtcacttgtcta
aagaatgccatctcctactttagtgatcatgctgattacttgaagaatgttgctgctatg
atttttccattactccttgttctacctcagacacagagcttgaatttaaaggctctggga
cttgtcaacaaaataaactggccactttatcagaatattgttgtgtcttcttttggaaaa
gggacattgatacctggaagtttatcttcaattaacttgaagactattgataacatggct
aagaatttcatggtccatcccaaagagcatattgcttggtttgttgaaagctgcagtgat
ttggagttgtcaaagacactcttcttttttgttcttttgcagtctcttttgataaaacca
aaagatgaagacatttgtgctctatttgaatgtgtatttcctattctaaaggctgagtgg
gaaacatcagtgacagctggtgatgtctcattggatgagttcaagtctgaagtgttagac
tgggattgcagtgcattctttaatgatcttttgtatgtcaagctgagccatctaaatgtg
aaggttatgatttgcatattttggagactagcacaactaatatcagtactaccttccgac
attctgcttcatgatgatgataagtgggtcagcaagataagggatctgtttgtatttttt
gcctcatctaaattgaagcatgcattccacgaacacctccattacttagcagcacagtgc
agaatatcacctccccgcctcttatccaagtttttcacagaggaaggtgttcctgctgca
gtccaggttgaaagtcttcaatgctatgcatttctttgtagcctgtcacaagataaatgg
caaattgaacttttagctgaatttccttctgttcttgttccattggcgggtgataatcag
actataagggttgctgccatgaactgtatcgattcattgcgtacattgtggtgtcatgtt
gagcgttctggcaagaaaaatggtaacaatgcaacgtggatccattttctgggtgatgtt
ttggcgttgatggatcagcagaaaacattcatattgtccgacaagaaatttcttccttca
ttgtttgcatctgctttgagctcatcctgtccaaacatcttagagcctcgaaatatcttg
gtacctcaaaatatagaaaaaaggtttgaccagcctacaaaaataaaaattcttggcttc
attttgggttccactcttaaattctctaactatgggaagctaatgattttatccttattc
aaaggaattgggaatgcccttatgcacgttccagaagttgggccattgttgtcctcttta
ctggagcagtactatgatgagctcaaaaagtcttgcccaaaattgtcaaacactgaaact
cagataatgtgccttttgctggagagctgtattatgtcatctccctctggtggaaatgat
cttcaacatcttttactgaaagctttgcggttgggcagcatgacattggatgaccctgcc
tgtgtgaagccttgtatcactgtcttgaacaaacttaacaatcaattctatatggagttg
aagaatgaagtaaaggagcatttattttgtgagctcgtgtttttgtggcataatgataat
catgatgtacaacgtgcaactaaagaggcattaatgtgcatagatattagtttctcaact
gttggccacatgcttgatcttatacttgcacaaaagagttgtataagtagttcagcagaa
gaaaagatggcgaagaaacaaaaattcataggacatcaagaagcaggatatcctcctaat
gacatatgcagaagagttaatccagtctacatccttagttcccttcttgatgttttgcta
ctgaagaaggacataacaaacaggcatttacttttagggcccttatttaagcttcttagc
aaggtattttcagaagaatgggtgaatggtgccttttccccggtgataaggttaagccaa
ccttcaagtccttcggaagctaacaattacacagtatatcatatacaacagactctgttg
ataatcctggaggatataattatttctcttaaaagcatggctccgctaaatgaaaaaatg
ataaatgaaattaacattaagctattgatagagtgcgcccggaattccacaggttcagtc
acctgcaaccatgtattttctgtactttctgctgttaccagagtctttgcaggagaagtt
ttggagcatatgcttgatattctagaagttattggacaagcagctgtcacacagattgac
agtcattcgaagcatgtttttgaggatcttatatctgcaattgttccgtgttggctggct
cagacagatgatgtggagaaattactgaagattttcatggatatattgcctgaaattgtt
gagcacagaaggctgtcatttgtgttatatctattaagaactttgggtgagggtaaaagc
ttagcctcattgcttatcctacttttccgttcattaatttcaaggaaagctgcctgtttc
ctttatgttgagacacatgctttaacattttatactgaggagtgggaatataaatttgca
gtgcaaatttgtgaacaatatacaagtacgatttggcttccttctttagtcatgctgctt
gaacagaggggaaatagtgatgttgaccaggcactgtttctggaattgtttattgtaatg
caattttctttgcaaaagttgcaagatccagaatttgtgtttaagttgaaatcaggagaa
gataccacagtcattcagagggcgttgggtgagcttatggagcatgttgttttactcttg
caacttgtagatgcatggaaaaagcaactgaatttccctgtaattctgaggagagagttg
aaggaaactatgcgtgcggttgtaaggaatctaacaacagtcatgatacctgccggatac
tttaagagcataattaaattgcttcaccatgcagacaagaatgttggaaaaaaggctctt
gggctgttatgtgaggcttcgagaaatcataaaaatgtcagcttaaagcttaaagacaat
aaaggttcaaggtcaactccaagttttcttttgcttcatatgaacgaaacttctcaagaa
tcacttaataaattgtgtttagaaattatgcgagtacttgatgattcatcgaatacctcc
ttgaaagtggcagcagtttcagcattagaagttctggctgaaagatttccttcgaataat
tccatctttagtttgtgccttggatctgttacaagacatattgcatctcataacttggct
gtgacttctagctgcctcaaaacaactgctgccctgatcaatgttctaggtccaaaatca
ctggcagaacttcccaagattatggacaatgtgatgaagtcatctcgtcgagtattggct
gatatgaaacccgaaaccattgatgttttatcagcctcaaatgaatcccatttttatgtt
ctcatcactttggaggcagttgtggacaagcttggtggatttttaaatccgtatcttaca
aatatcatggagcttctggtgctttatcctgaatatgtttcaggagtggatgtaaaggtg
gagtctagagctcatggaatacgaaagcttcttgctgaaaaaattcctgttcgacttgcc
ctgccacctttgttaaaattatacccagcttccattgaggctggggataaaagcttaaca
attgtatttgatatgttgggaaccataattggtacaatggacagatcatctattgtggca
ttccatggaaagatatttgacctttgtttggttgctcttgatctgcgccgtcaaagtcct
ccttcagttcaaaacattgatgtagtggaaaaaggtgtgcttaacgcaatgactgttcta
accttaaaacttactgagagcatgttcaagcctcttctcataaagagtattgagtgggca
gaatctgaagtggatgaaactgcatccagcggaagcattgatagggccatatcattctat
ggcatggtaaataagcttacagagagccatcggtcattgtttgttccttacttcaaacac
ttgcttggtagttgtgttcatcatcttagcgatggtggagatgtgaaagtgtctagagtg
aatcggaagaaaaaggccaggattctagatgatggcaatataaaagaaataggcagtgtg
tctatcaagggctggcatctcagggctctagtcctgtcatccttacataagtgtttcttg
tacgacactgggaccttgaagtttcttgactgctcaaatttccagatgttgttgagacct
attgtttcacaacttgtcgtagatccaccagttctgttgaatgacagcatgaatatacta
agtgtgaaggaagttgatgacctactggttgtgtgcatcggtcaaatggcagtgactgct
ggatctgaccttttgtggaaacctttgaatcatgaggttttgatgcagacacggagtgaa
aaattgcgagctaaaatattgggcctcaggattgttaaatattttgtggagaacttgaaa
gaagaatatctagtgttcatagctgaaacaatccccttccttggcgaactgcttgaggat
gtggagctttcagttaaatctcttgctcaggaaattctgcaggaaatggagtctctgagt
ggggaaagccttcggcaatacctatga
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