Glycine soja (wild soybean): 114384808
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Entry
114384808 CDS
T06057
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114384808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114384808
03012 Translation factors [BR:
gsj03012
]
114384808
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114384808
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114384808
Translation factors [BR:
gsj03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114384808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
R3H
HA2_C
HA2_N
nSTAND3
AAA_19
Ank_2
AAA_22
ATPase
AAA_14
AAA_23
ABC_tran
AAA_7
Rad17
NPHP3_N
Sigma54_activat
PhoH
Motif
Other DBs
NCBI-GeneID:
114384808
NCBI-ProteinID:
XP_028200409
LinkDB
All DBs
Position
14:complement(2373052..2381055)
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AA seq
1164 aa
AA seq
DB search
METTTKTNKTGKKKGEPLFRQNPNVDEVTRICISQILEQFRASNDEVYKFDAGLSNQERA
LVHQMALKMGFRSKSYGLGKERRVCVQKMKKKVDTDNGFGSLPPFTFSGEAKWVLGDLFA
HHPPGEGNLWEMVGENSEDTTTDGTKQRPGDIFSRPSMTKAEIARRLEALASRMNNVSNL
KQINEGRSKLPIASFKDSITSTVESHQVVLISGETGCGKTTQVPQFILDHMWGKGEVCKI
VCTQPRRISATSVSERIASERGETIGENVGYKIRLESRGGRQSSIVLCTTGVVLRVLVSK
GSHSSKTGRVKDEISGITHIIMDEIHERDRYSDFMLAIIRDMLPLYPHLRLILMSATIDA
ARFSQYFGGCPIIHVPGFTYPVKTFYLEDVLSIVKSRHDNHLDSTTCSIPKNTCELSEEE
KLSIDEAINLAWSNDEWDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAGKGRVGDMCML
LSCGADFCLRAKDGMAALEIAERENQPEAAEILKKHMDSDFSNSMEEKKLLDKYLATVNP
ELVDDVLIEQLIRKICIDSTDGGILVFLPGWDDINRTRERLLASSFFKNSSMFMLISLHS
MVPSMEQKKVFRRPPHGCRKIVLSTNIAETAITIDDIVYVIDTGRMKEKSYDAYNNVSTL
QSSWISKASAKQREGRAGRCQPGICYHLYSRTRAVSLPDFQIPEIRRMPIEELCLQVKLL
DPSCKVEEFLCKTLDPPVFESIRNAIIVLQDIGALSNDEKLTQLGEKLGSLPVHPLICRM
LFFAILMNCLDPALTLACASDYRDPFTLPMLPEEKKRASAAKYELASLYGGCSDQFAILA
AFECWNNAKKMGLEARFCSQYFVSSSTMNMLSGMRRQLQAELIRLGFIHEDVSGYSVNTH
DPGVLNAVLVAGLYPRVGRFLTNKSGKRVIVETTSGDKVRLHNHSINFKLSFKKKLDDTL
IVYDEITRGDGGMNLRNCTVVGPLPLLLLSTEIAVAPAEENDEGDEDDVGGSEDEAGSED
VMEFDAESSGGREDKLMSSPDNMVKVIMDRWLYFCSTAIDVAQLYCLRERLSAAILYKVT
NPRNTLPPIMAASVHAIACILSCDGCIGVPAMLEGVETLTTMVNATTLGKPATGTRRFGK
RPKGSLAELLNYDGRQTSGPYFKA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgacgacgaagacgaacaaaacagggaagaagaaaggagagccacttttccgt
caaaaccccaacgttgatgaagtcaccaggatttgcatttcccagattctagaacaattc
cgagcttccaatgatgaagtgtacaagtttgatgctggtttgtccaaccaagagcgtgct
ttggtgcatcaaatggccctcaaaatggggtttagatctaaaagttatgggctagggaag
gaaaggagagtgtgtgttcaaaaaatgaaaaagaaggttgacacggataacgggtttgga
agtcttcctcctttcacattttctggagaggcaaagtgggtgttgggtgatttgtttgct
catcatccacccggtgagggaaacttgtgggagatggttggagaaaatagtgaagacact
actactgacggaacaaaacagaggccgggtgatattttcagccggccctctatgaccaaa
gctgaaattgctaggagattggaagctcttgcttctagaatgaacaatgtctctaacttg
aaacagatcaatgaagggagatctaagcttccaattgcgtctttcaaggattcaattaca
tccactgttgaatctcaccaggttgttctcatatctggtgagactggttgtggaaagact
acgcaggtcccacaatttattttggatcatatgtggggtaagggagaggtatgtaaaata
gtttgcactcagcctcggcggatctcagcaacttcagtttccgagagaatcgctagtgag
agaggagagactattggagaaaacgtgggatataagatacggttagaaagcagaggtgga
aggcaatcatcaattgtgctatgtactactggagtggtattaagggtgctggtttccaaa
ggttctcattcgtcaaagacagggcgtgtgaaggatgagatttctggcatcactcacata
attatggatgaaattcatgaaagggatcgatactcagacttcatgttggcaatcatcaga
gacatgctccctttatatcctcacctacgtctgatattaatgagtgctaccattgatgct
gctagattttctcaatattttgggggctgcccaatcatccatgttccgggcttcacttat
ccggtcaaaactttctatttggaggatgttctttctattgtaaaatcccggcatgataat
catcttgatagtaccacatgtagtattccaaaaaacacttgtgagctaagtgaagaagag
aagctttccattgatgaagctattaatttggcctggtctaatgatgagtgggacctgctg
ttagaattggtttcttcggaaggaaccccagaactatttaattaccaacattctttaact
ggtcttactccgttaatggtgtttgctggaaaaggtagagtgggtgatatgtgcatgctg
ttatcttgtggggcagatttctgtttaagggccaaagatggaatggctgcattggagatc
gctgaaagggaaaaccaaccagaagcagccgaaatattgaagaagcacatggatagtgat
ttttccaactccatggaagagaagaagttacttgataaatacctggcaacagtcaaccca
gaacttgttgatgatgttttgatagagcagctgataagaaaaatatgtattgattcaaca
gatggagggatccttgtttttcttccaggctgggatgatataaatagaacgcgtgagaga
ttgcttgcatcatcctttttcaagaattcctcaatgtttatgctcatatctctgcattca
atggttccaagcatggaacaaaagaaggtttttaggcgcccacctcatggttgtcgcaaa
attgtactatcaaccaatattgctgaaacagccatcaccatcgatgatatagtgtatgtc
atagacactggacgaatgaaggaaaaaagctacgatgcttataacaatgtgtcaactctt
cagtcatcttggatttcaaaagcaagtgctaagcagcgagagggacgtgctggccgttgt
caacctggaatatgctatcatctatattcaagaactcgagcagtttccttgccagatttt
cagattccggaaattaggagaatgcctattgaggagctttgtctgcaggtaaagttgctt
gatccaagttgcaaagtagaagaatttctatgcaagacattagatcctccagtttttgag
tccatacgcaatgcaattatagttcttcaagatatcggggcattgtcaaatgatgaaaaa
ctcacccaactaggggagaagcttggttctcttcctgttcacccattaatatgcaggatg
cttttttttgctatattgatgaactgccttgatccagctttaactcttgcatgtgcatct
gattatagagatccatttacacttccaatgttacctgaagaaaagaagagagcttcagct
gccaaatatgagcttgcttctttatatgggggttgtagtgatcagtttgccatattggct
gcatttgaatgctggaataatgcaaagaaaatgggtctagaagcacggttttgttctcag
tattttgtgtcttcaagcaccatgaatatgttatcaggcatgcgcaggcaactccaagca
gaactaattcgacttgggtttattcatgaagacgtttcaggttacagtgtgaatacacat
gaccctggtgtgctcaatgcagttttggtagcaggtttgtatccaagggttgggaggttt
cttacaaataaaagtggaaaaagggttattgttgaaacaacaagtggagataaagttcgc
ctgcacaatcattccataaattttaagttgtcattcaagaaaaaattagatgacacttta
attgtgtatgatgagattactcgcggtgatgggggtatgaacctaaggaactgcacagtt
gttggaccacttccacttttgctgctttcaacagagattgctgttgccccagcagaagaa
aatgatgaaggggatgaggatgatgtaggaggcagtgaagatgaagctggaagtgaagat
gtgatggagtttgatgctgagtccagtggaggccgtgaggataagttgatgtcttctcct
gataatatggttaaagtaatcatggaccgttggctttatttttgttcaacagcaattgat
gttgctcagctatactgcttgagagagagattatcagcagcaattttatacaaagtaaca
aatccaaggaatacacttcctcccatcatggcggcatctgtgcatgctatagcttgtatt
ctgtcttgtgatgggtgcattggtgtgccagcaatgttagaaggtgtggaaacactaacc
actatggtaaatgcaacaactttaggcaagccagcaacaggtactaggcgttttggtaag
agaccaaaaggatcccttgcagagcttttaaattacgatgggcgccagacctctgggcct
tattttaaagcatag
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