Glycine soja (wild soybean): 114384958
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Entry
114384958 CDS
T06057
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04142
Lysosome
gsj04144
Endocytosis
gsj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114384958
04142 Lysosome
114384958
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114384958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114384958
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsj04147
]
114384958
Membrane trafficking [BR:
gsj04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
114384958
Exosome [BR:
gsj04147
]
Exosomal proteins
Proteins found in most exosomes
114384958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
114384958
NCBI-ProteinID:
XP_028200616
LinkDB
All DBs
Position
14:complement(48556790..48569908)
Genome browser
AA seq
1703 aa
AA seq
DB search
MAANAPITMKETFTLGSVGINQQFITFTHVTMESDKYICVRETGPQNSVVIIDMSMPMQP
LRRPITADSALMNPNSRILALKAQVPGTTQDHLQVFNIETKAKMNSHQMKEQVVFWKWIT
PNTLGIVTQMSVYHWSVEGNGEPMKMFDRTANLANNQIISYRCDPNEKWLVLIGIAPGSA
ERPQLVKGNMQLFSVDQQRSQALEAHAASFASFRVAGNDKDSTLICFASKSMNAGQVTSK
MHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVSMQISNKYGLIYVITKLGLLFVYDLE
TSTAVYRNRISPDPIFLTTEAPSVGGFYAINRRGQVLLATINEAAIVPFVSGQLNNLELA
VNLAKRGNLPGAEELVVKRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQA
GQTPPLLQYFGTLLTRGKLNSYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVK
TVDNDLALKIFIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRADAQG
AVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQTKVLEI
NLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLFIRALQHYSELPDIKRVIVNTHAIE
PQALVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQTAKEYCEQLGVDACIKLFEQFKS
YEGLYFFLGAYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMETK
LPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPED
FIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSN
NNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELVNVTNKNSLFKLQARYV
VERMDADLWEKVLNPENEFRRQLIDQVVSTALPESQSPDQVSAAVKAFMTADLPHELIEL
LEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEANLYEE
AFAIFKKFNLNVQAVNVLLDNLRTIDRAVEFAFRVEEEAVWSQVAKAQLREGLVSDAIES
FIRADDSTHFLEVIKASEDAEVYHDLVRYLLMVRQNTKEPKVDSELIYAYAKIDQLGEIE
EFILMPNVANLPNVGDRLYDEALYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARKA
NSSKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEFYQNRGCFNELISLMESGL
GLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWMELTYLYIQ
YDEFDNAATTVMNHSPEAWDHMQFKDIIVKVASVELYYKAVHFYLQEHPDIINDLLNVLA
LRVDHTRVVDIMRKAGHIRLVKPYLVAVQSNNVSAVNEALNEIYVEEEDYDRLHESIDLH
DNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDCMETCSQSGDR
ELSEDLLVYFIEQEKKECFASCLFVCYDIIRPDVALELAWMNNMIDFAFPYLLQFIREYT
GKVDELIKDKIEAQKVEKAKEKEEKEVLAQQNMYAQLLPLALPAPPSMGGGGYAPPTPPI
GGMGMPPMPPFGMPPMGGGSGSY
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaacgctcctatcaccatgaaagagaccttcacgctgggaagcgttggaatc
aaccagcagttcattacatttactcatgtgacaatggaatcggataaatacatttgtgtc
agggaaactggacctcagaacagtgttgttatcattgacatgagcatgccaatgcagcct
ttgagacggcccataaccgctgattcggctttgatgaaccccaattccagaattcttgct
ctcaaagctcaagttccaggcaccactcaggatcatttgcaagtttttaacattgaaacg
aaagcaaagatgaactcgcatcagatgaaagaacaggttgtcttttggaagtggataact
ccaaatacactgggaattgtcactcagatgtctgtatatcattggtcagttgaaggcaat
ggtgagccaatgaagatgtttgaccgaacagctaatctggctaataaccaaattattagt
tatcgttgtgatcctaatgaaaagtggttggttttgattggaatagctcctggttcagca
gagagaccacaactagtaaaaggaaacatgcaactcttctctgtggatcagcaacgtagt
caggctcttgaagcacatgctgcctcatttgcttcgtttagagtggctgggaatgataag
gattctactcttatttgttttgcatcaaagagtatgaatgctggacaggttacatcaaag
atgcatgtcattgaacttggtgcccagccaggcaaaccatcatttactaagaaacaagca
gatctgttcttccctccagactttgctgatgactttcctgtgtcaatgcagatttcaaat
aaatatggactgatttacgttatcacaaagcttgggctgttatttgtctatgatctggag
acttccaccgcagtttatagaaaccgaatcagtcccgatcctatatttttgaccacagaa
gcaccttcagtaggggggttttatgccatcaatagacgtggccaggtgttgcttgctact
ataaatgaggcagccattgtaccttttgttagtggccagctaaataatttggaacttgca
gttaatctggctaaaagaggaaacctccctggtgcagaagaattggttgtcaagcggttt
caagaattatttgctcagaccaagtataaggaagctgcagagcttgctgcagaatctcca
caaggaattcttcgaactcctgacactgttgctaaatttcagagtgtacctgtgcaagct
gggcagacaccaccactgttacagtactttggtactctgttaaccaggggaaaactcaat
tcttatgagtcattggaattgtctcggcttgtggtaaatcaaaacaaaaagaatcttctg
gaaaattggctagcagaggacaaacttgaatgcagcgaagagcttggtgaccttgtgaag
accgtggataatgaccttgcattgaaaatatttatcaaagccagagccacaccgaaagtt
gttgcagcatttgctgagaggagggaatttgacaagattctgatatactcaaagcaggtt
ggatacacacctgattacatgttccttctgcaaacaatattaagggcagatgcccagggt
gctgtaaattttgctctgatgatgtctcaaatggaggggggttgccctgttgactataac
acaataaccgatctctttcttcagaggaatttaatccgcgaggcaactgcctttttattg
gatgtgctgaagccaaacctaccagaacatggatatcttcaaacgaaggtactggaaatt
aatcttgtgacctttccaaatgttgctgatgctatattggccaatggcatgtttagtcat
tatgaccgtccacggattgctcagctttgtgaaaaggccggccttttcattcgggctctt
cagcattattccgagttgcctgacatcaaacgtgtcattgtgaatacacatgccattgaa
ccgcaggctctagttgagttctttggaaccctttcaaaagaatgggcgctagagtgcatg
aaagatcttttactggtcaaccttaggggcaaccttcaaataattgtgcagactgctaag
gaatattgtgaacagctgggtgttgatgcatgcattaaactctttgagcaattcaagtcc
tatgaaggactatactttttcttgggtgcatatttgagctctagtgaggatcctgatatt
cacttcaagtatattgaagcagctgcgaaaactggacaaattaaggaggtggagcgtgtt
actcgggaatcaaacttttatgatgctgagaagaccaagaactttctaatggagaccaag
cttccagatgcacgaccattgataaacgtgtgtgatcgttttggttttgttccggatctc
acccattatctctacaccagcaacatgcttcgttatattgaaggatatgttcaaaaggtg
aatccaggaaatgctcctctagttgttggacaattgttagatgatgaatgccctgaagat
ttcattaaaggtcttatactttcagttcgttctcttcttccagttgagcctttagttgaa
gaatgtgagaagagaaatcgtctccgcttgcttactcagtttttggagcatcttgtaagt
gagggaagccaggatgtgcatgtacataatgctctgggtaaaattatcattgacagcaat
aacaatcctgagcattttcttacaaccaacccatattatgattctcgtgttgttggtaaa
tattgtgagaagcgggatcctacacttgctgttgttgcttaccgaagggggcaatgtgat
gatgagcttgttaatgttaccaataaaaattccttgttcaaactccaagccagatatgtt
gtggagcgtatggatgctgacctctgggagaaagttcttaatcctgagaatgagttcaga
aggcagttgattgatcaagtggtgtccactgctttgcctgaaagccagagtcctgatcaa
gtttcagctgcagtgaaagcttttatgactgctgatcttccccatgagttgattgagctt
cttgaaaagattgtcttacaaaattctgctttcagtggaaactttaatctgcaaaatttg
ctgatcctcactgcaatcaaggcagacccctcaagagtcatggattacattaataggctg
gacaactttgatggccctgctgttggggaggtggcagtagaagcaaacctatatgaagaa
gcttttgccattttcaaaaaatttaatttgaatgttcaagctgttaatgtcctactagat
aaccttcggaccattgatcgagctgtggagtttgcattccgggttgaagaagaggctgta
tggagccaagtggctaaggcacaactaagagaaggcttagtaagtgatgcaattgagtca
ttcatccgtgcagatgattccactcacttcttagaggttataaaagcttccgaagatgca
gaagtataccatgacctagtaaggtaccttctcatggttaggcagaataccaaagagccc
aaggtggacagtgagctcatatatgcatatgcaaagattgaccaacttggagaaattgaa
gagtttatattgatgccaaatgttgctaatttaccaaatgttggagaccgtttgtatgat
gaggctctctatgaggctgcaaaaattatatttgcttttatttcaaactgggctaagtta
gcagtgacattggtgaagcttaaacaattccaaggtgctgttgatgctgctaggaaagca
aacagttcaaaaacatggaaggaagtttgttttgcctgtgttgatgctgaggaattccga
ttggctcagatttgtggtcttaatgtcatcattcaggtggatgatttggaagaggttagt
gagttttatcagaacagaggatgctttaatgaactcatatctctaatggagagtggactt
ggactggagcgtgcccatatgggtatctttactgagttgggagttctttatgcaagatat
cgtcctgagaagttaatggagcacattaagctgttctcaactcggcttaacattcccaag
cttattcgagcctgtgatgagcagcagcattggatggaacttacatacttatacatccaa
tatgatgagtttgataatgctgcaactactgtaatgaatcactctcctgaagcatgggac
cacatgcaattcaaagatattatagttaaggttgcaagtgtggagctctactataaggct
gttcacttctacttgcaagaacatcctgatattataaatgatcttcttaatgtacttgcc
cttcgtgtggaccacacccgtgttgtggatataatgcggaaggctggccacatccgattg
gttaagccgtacttggttgcagttcaaagcaataatgtgtctgctgttaatgaagctttg
aatgaaatttatgttgaggaggaggactatgatagacttcatgaatcaatagatctgcat
gacaacttcgatcagataggtcttgcacagaagattgagaagcatgagcttcttgagatg
aggcgtgtcgctgcttacatttataagaaagctggaagatggaagcagtccattgctttg
tcaaaaaaagacaatctttacaaggactgtatggaaacttgctctcaatctggtgaccgt
gaactctcagaggatttgcttgtttactttattgagcaggagaagaaagaatgttttgca
tcttgcctctttgtctgttatgatataatacggccagatgttgctcttgagctagcttgg
atgaacaatatgattgattttgctttcccatacctcttacagtttattcgagagtatact
ggtaaagttgatgagcttatcaaggacaaaattgaagcacaaaaagtggagaaagctaaa
gagaaggaagagaaggaagttcttgcacagcagaatatgtatgcccagttactaccactt
gctttgcctgcaccaccaagtatgggtggaggagggtatgcaccaccaacaccccctatt
ggtggtatggggatgcctccgatgcccccttttggcatgcctccaatgggcggtggcagt
ggctcctactga
DBGET
integrated database retrieval system