Glycine soja (wild soybean): 114384974 Help Entry 114384974         CDS       T06057                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism gsj  Glycine soja (wild soybean) Pathway gsj04120   Ubiquitin mediated proteolysis gsj04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:gsj00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     114384974  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     114384974  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:gsj04121]     114384974 Enzymes [BR:gsj01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      114384974 Ubiquitin system [BR:gsj04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     114384974   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      114384974 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_WDR19_1st Beta-prop_EIPR1 EIF3I Beta-prop_DCAF4 zf-C3HC4_2 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_EML zf-C3HC4 Beta-prop_WDR90_POC16_2nd WD40_like WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 zf-C3HC4_3 zf-RING_2 zf-RING_UBOX Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_IFT122_1st zf-C3HC4_4 Beta-prop_DCAF12 YbfN U-box zf-RING_5 DUF1664 Beta-prop_IFT122_2nd Baculo_p24 Beta-prop_SPT8 APG6_N zf-RING_10 Motif Other DBs NCBI-GeneID:  114384974 NCBI-ProteinID:  XP_028200650 LinkDB All DBs Position 14:complement(3996795..4004483) Genome browser AA seq 675 aa AA seqDB search MEELSAGPLVPAVVKPEASKGAAVAADTSAAASGGTFPASTSEPDKDFLCPICMQIIKDA FLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNTNLFPNFLLDKLLKKTSARQISKTASP VEHFRQALQKGCDVSIKELDTLLSLLAEKKRKMEQEEAERNMQILLDFLHCLRKQKVDEL KEVQTDLQFIKEDINAVEKHRMDLYRARDRYSVKLRMLDDSGGRKSWHSSMDKNNSGLIS SPLNLRGGLSSGSHTKKNDGKSQISSHGHGVQRRDAITGSDSQYINQSGLSLVRKKRVHT QFNDLQECYLQKRRHAADRPHSQQVRDINLISREGYTAGLEDFQSVLTTFTRYSRLRVIA ELRHGDIFHSANIVSSIEFDCDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEMSTR SKLSCLSWNKYAKNQIASSDYEGIVTVWDVTTRKSLMEYEEHEKRAWSVDFSRTDPSMLV SGSDDCKVKIWCTNQEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISR PVHVFSGHRKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFKGHANEKNFVGLTV SSEYIACGSETNEVFVYHKEISRPLTCHRFGSPDMDDAEDEAGSYFISAVCWKSDRPTIL TANSQGTIKVLVLAA NT seq 2028 nt NT seq  +upstreamnt  +downstreamnt atggaagagctctccgcggggcctctcgtccccgccgtagtcaaaccggaagcgtccaaa ggcgccgccgtcgccgccgacacctccgccgcggcctccggcggcacgttcccggcctcc acgtcggagccggacaaggacttcctctgcccgatttgcatgcagatcatcaaggacgcg ttcctcaccgcgtgcggccacagcttctgctacatgtgcatcatcacgcacctccgcaac aagagcgattgcccttgctgcggccactacctcaccaacaccaacctcttccctaacttc ttgctcgacaagctactgaagaagacttctgcgcgtcaaatatcaaaaaccgcttcacct gtggaacatttccggcaggcattgcaaaagggttgtgatgtgtcaattaaggagctagac acccttttgtcacttcttgccgagaagaaaagaaaaatggaacaagaagaagctgagaga aatatgcaaatattgttagacttcttgcattgcttacgcaagcaaaaagttgatgagttg aaggaggtacaaactgatctccagtttataaaagaggacattaatgctgtggagaaacat agaatggatttgtatcgtgcacgggacaggtactctgtaaaattacggatgcttgatgac tctggtggaagaaaatcatggcattcatcaatggacaagaacaacagtggccttatatct agtcctctaaatctacgaggagggttgtcatcagggagccatactaagaaaaatgatgga aagtcccaaattagctctcacgggcatggagttcagagaagggatgccatcactggatcc gattcacaatatataaatcaatcgggtctttctctagttagaaagaagagggtgcataca cagttcaatgacctacaagaatgttacctacaaaagcgacgacatgcagctgataggccc catagtcaacaagtaagagatataaatctcataagtcgagaaggttatactgctggtctt gaagattttcagtcagtcttgacaactttcacacgctatagccgattgagagtcattgca gaactaagacatggggatatatttcattcagcaaatatagtgtcaagcatagagtttgac tgcgatgatgatttgtttgctactgctggagtttcccggcgcatcaaagtttttgacttt tctgctgttgtgaatgaacctacagatgctcactgtcctgttgtggagatgtctacacgt tcaaaacttagttgcttgagttggaataaatatgctaagaatcaaatagctagtagtgat tatgaaggaattgtgactgtttgggatgtaaccactcgaaagagtttaatggaatatgaa gagcatgaaaagcgtgcatggagtgttgatttttcaagaacagatccctctatgcttgta tctggtagcgatgactgtaaggtcaaaatttggtgtacaaatcaggaagctagtgttcta aatatagacatgaaagcaaacatatgctgtgtcaaatataatcctggatctggcaattat attgcagttggatcagcagaccatcacatccattattatgatttgagaaatatcagccgt ccagtccatgttttcagtgggcacaggaaggctgtttcatatgtgaaatttctgtctaat gatgaacttgcttctgcatcaacagatagtacactgcgattatgggatgtgaaggaaaac ttaccagttcgtactttcaaaggccatgcaaatgagaaaaactttgttggccttacagta agcagtgaatacattgcgtgtggcagtgaaacaaatgaagtctttgtgtaccacaaggaa atctcgagacctttgacttgccacagatttgggtcccctgatatggatgacgctgaagat gaggctggatcgtacttcattagtgctgtatgctggaagagtgatcgccccactattcta actgcaaatagtcaaggcaccatcaaagtgctggtgcttgcagcttga

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