Glycine soja (wild soybean): 114385048
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Entry
114385048 CDS
T06057
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114385048
Transcription machinery [BR:
gsj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
114385048
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Adenine_glyco
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
114385048
NCBI-ProteinID:
XP_028200788
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Position
14:complement(39369550..39374618)
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AA seq
512 aa
AA seq
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MGVVTVSTLAARTPLRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETA
KKDQKRVGKTSESLKRVRAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDID
SKVERVLWRRKKVGNEHDDENCDIVVRNQNKKAKRLSLDKRITLKNNAKEEVIDQTQKIR
NVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQAKED
LQSVGKEITDGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQDFASG
RRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERV
RVDIQRTKLKLTFELQRSPTEEELVERIGISPERYYEVMKASKPILSLHSRHITTQEEYI
NGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNL
NISREMVRKHEVKALMKLKHPARLDYLRRYVV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttactgtttctaccttagctgctaggacgccattaagattgaatacaagg
ttgaccagtcatcagcaggtgcataaaagacctttaattgtagcttttaaaggaaataaa
ttgaataaagccgctttggtttcacctcaggagcaaattcctctacccatagaaacagca
aagaaagaccaaaaaagggtaggaaagactagtgagtctctgaagagagtgagagctgtc
tctattgttgaaacctctccatgcaccttggatatggactacaatgaagctgcagccaaa
cttgaaaatatatataaactcagccctgtatctgatacctgtaatatggaagatattgat
agtaaagtcgagagagtcttgtggaggaggaagaaggttggtaatgaacatgatgatgaa
aattgtgatattgtggttagaaaccagaataagaaggccaaacgattgagtcttgataag
aggattacattgaaaaataatgcaaaggaggaagtgattgaccaaactcagaagataaga
aatgttaagaatagagtacaaaatattgatgtgcttatcagggattattcagcatcaact
gatttagttagcatggactggaagaaaatgaagattccggcagttcttccttcttcagag
catgcatggttgttcaagttgatgcaaccaatgaaggcactcctacaagcaaaagaagat
ttacagtcagtggggaaagaaattacagatggtgaactagctgatgcaacaaacatgagc
attattcaagtaaggaaagctatagaggttggccgagctgcaagaaacaagctcataaag
cacaatctccggcttgtgttgttcgtgattagcaaatattttcaagattttgcaagtggc
cggaggtttcaagatctttgtcaggcaggagttaagggacttatcacagcaattgatcgt
tttgagccaaaaagaagacttcagctatctacatacagtttattttggataagacattct
atcgttcgttccataaccctctcaagcttcacacgcgttccttttggacttgaaagggta
agagtagatatccaaagaactaaacttaagttaacatttgagctccagaggtcaccaacg
gaagaagagttagtagaaagaattgggatctcacctgaaagatattatgaagtaatgaag
gcatcaaaacccattttatcccttcattcaagacatataaccacacaagaggagtatatt
aatgggattactgatgttgatggtgttaatggtgataataggaggcaacttgctgttcta
agacttgctcttgatgatgtgcttgattccttgaagccaaaggagagcctagtgatcaga
cagagatatggacttgatggcaagggtgacaggacattgggagaaatcgctgggaacttg
aatatttctagggaaatggttcggaagcatgaagtcaaggctctcatgaagcttaagcat
ccagcacggttggattatcttcgtcgttatgttgtataa
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