Glycine soja (wild soybean): 114385198
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Entry
114385198 CDS
T06057
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114385198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114385198
Spliceosome [BR:
gsj03041
]
Complex A
U1 snRNP components
U1 related factors
114385198
Complex B
114385198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
114385198
NCBI-ProteinID:
XP_028201019
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All DBs
Position
14:complement(8315626..8331689)
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AA seq
997 aa
AA seq
DB search
MTFHLQFRPVTQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPMQQLTQ
RPMQPGHPAPSSQAIPMQYIQTNRPLTSIPPHSQQNVPPLSNHMPGLAVSVAAPHSSYFT
LSYGQQQDNANALAQYQHPPQMFAPPSGQPWPSSASQSAVAVTSVQPAGVQSSGATSTDA
VINATNQQSLSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSS
EGRKYYYNKVTQQSTWSIPEELKLAREQAQNAANQGMQSETSDTCNAVVSSTETPTPTAA
NAASLNTSLTSNGLASSPSSVTPIAATDSQRLVSGLSGTSVSHSMATPSTTGVEPSTVVT
TSAAPTIVAGSSGLAENSPQQPKMPPVVENQASQDFASANGSSLQDIEEAKRPLPVVGKN
NVTPPEEKTNDDETLVYANKLEAKNAFKALLESVSVQSDWTWEQAMREIINDKRYNALKT
LGERKQAFNEYLGQRKKLEAEERRMKQKRAREEFTKMLEECKELTSSMRWSKAISMFEND
ERFNAVERPRDREDLFESYMVELERKEKENAAEEHRQNIAEYRKFLESCDYVKVNSPWRK
IQDRLEDDDRYLRLEKIDRLLVFQDYIRDLEKEEEEQKRIQKDRIRRGERKNRDAFRKLL
GEHVSAGILTAKTQWREYCLKVRDLPQYQAVASNTSGSTPKDLFEDVAEDLEKQYHEDKT
LIKDTVKSGKITVVTTSVFEEFKVAVLEGAACQTISEINLKLIFEELLERAKEKEEKEAK
KRQRLADDFTNLLYTFKDITTSSKWEDCKSLFEETQEYRSIGDESYSREIFEEYITYLKE
KAKEKDRKREEEKAKKEKEREEKRKEKEKKEKDREREKDKSKERNKKDETDSDNQDMADS
HGYKEEKKKEKDKERKHRKRHQSSIDDVDSEKEEKEESKKSRRHGSERKKSRKHANSPES
DNENRHRRHKRDHWDGSRKTGGHEELEDGELGDDAEN
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcatctgcagtttcggccagtcactcaagctcagcaagggcaaccatttgtt
ccaatgaattcacaacaatttgggcctgcaggacatgctattccttcttcaaatgcgggg
atgcctgtcattcaaggtcagcaattgcagtattctcaaccaatgcagcagttgactcag
agaccaatgcagcctggtcatcctgctccttcatcacaagctatacctatgcaatatatt
cagacaaaccggccactgacatccattccaccacattcacagcaaaatgttcccccttta
agcaatcatatgcctggcttggctgtttcagtagcagctcctcattcttcatatttcaca
ctatcttatggtcagcagcaagataatgcaaatgcattggctcaataccagcatccacct
caaatgtttgctcctccttctggtcaaccttggccatcctctgcatctcagagtgctgtg
gctgttacatctgtgcagccggctggggtgcaatcatctggtgctacatcgactgatgcg
gtaatcaatgctactaaccagcaatccttatctgattggcaagagcacacttctgctgat
gggagaagatattattacaacaagaggacaaggcaatctagttgggagaaacctttagaa
ttgatgtctcctatagagagagctgatgcatcaactgtttggaaggaattcacttcttcc
gaaggaagaaagtattattataacaaggttactcagcaatcaacatggtcaataccagag
gaacttaagttggctcgtgagcaggcacagaatgctgcaaaccagggaatgcagtcagaa
acaagtgatacatgcaatgctgtagtctcctccacagaaacaccaacaccaacagcagct
aatgcagctagcttgaacacttccttgacatcaaatgggcttgcttccagcccgtcttct
gtcacaccaattgcagcaactgattctcaacggttggtttctggattatctgggacctct
gtttcccattctatggctaccccaagcaccacaggggtagaaccaagcactgtggtaact
acgagtgctgcacctacaatagttgccggaagctctggactagctgagaattcacctcaa
caacccaaaatgccacccgttgttgaaaatcaagcatctcaagattttgcttctgcaaat
ggatcttctcttcaagatatcgaggaagccaaaagaccattgcctgtggttggaaaaaat
aatgtgactccacctgaagagaaaaccaatgacgatgaaaccttggtatatgcaaataaa
ctggaagcaaaaaatgcatttaaagcgcttttggaatctgtgagtgttcagtctgattgg
acatgggaacaggcaatgagagaaattatcaatgacaaaagatataatgcactaaaaact
cttggtgagcgaaaacaggcttttaatgagtatttgggccaaaggaagaagctggaggct
gaagagaggcgcatgaagcagaaaagagcccgtgaagaattcacaaagatgttggaggag
tgcaaggaacttacatcatccatgaggtggagcaaagctattagtatgtttgaaaatgat
gaacgattcaatgctgttgaaagaccaagggaccgagaagatttatttgaaagctacatg
gtggaacttgagaggaaggaaaaggaaaatgctgcagaggaacaccgccagaatatagca
gaatatagaaaatttctggagtcctgtgactatgtgaaggtgaatagcccttggcgaaaa
atccaagatcggttagaggatgatgatagatacttgcgacttgaaaaaattgaccgcttg
ctagttttccaggactatattcgggacttggagaaagaagaagaggaacaaaaaagaata
cagaaggatcgaattcgtcggggtgaaaggaaaaaccgtgatgcatttcgcaagttgctt
ggagaacatgtttctgctggaattcttactgctaaaactcaatggcgagaatattgcttg
aaggttagggatttacctcaatatcaagctgttgcgtcaaatacctctggttccactcca
aaagatttgtttgaggatgttgctgaggatcttgaaaaacagtatcatgaagacaagacg
ctcataaaagatacagttaagtcaggcaagatcactgtagtgactacatcagtatttgag
gagtttaaggtcgctgtcttggaaggagctgcatgccaaacaatatctgagatcaatttg
aagcttatattcgaagagttgttagagagagctaaggagaaggaggagaaagaagccaag
aagcgccaacgccttgctgatgactttactaacctgttatatacattcaaggatattaca
acttcctcaaaatgggaggattgcaagtcactttttgaggagactcaagagtacaggtca
attggagacgaaagctatagtagagaaatttttgaggaatacatcacatacttgaaggaa
aaagctaaagagaaggatcgcaagcgtgaagaggaaaaggctaaaaaggagaaagaaaga
gaagagaaacggaaggagaaggaaaaaaaagaaaaggatagagaacgtgaaaaagataag
tctaaggaacgtaataagaaggatgaaacagatagtgataatcaagacatggctgacagc
catggttacaaagaggagaagaaaaaagaaaaggataaagaaaggaaacatcggaaaagg
catcagagcagtatagatgatgtggattctgaaaaggaagagaaggaagaatctaaaaaa
tcacgaaggcatggcagtgaacgcaagaagtctcggaagcatgcaaactctcctgaatca
gacaatgaaaaccggcatagaagacacaagagggaccactgggatggttccaggaaaact
ggggggcatgaggaacttgaagacggggagctcggggatgatgctgagaactag
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