Glycine soja (wild soybean): 114385300
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Entry
114385300 CDS
T06057
Name
(RefSeq) THO complex subunit 4B-like isoform X1
KO
K12881
THO complex subunit 4
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03015
mRNA surveillance pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114385300
09122 Translation
03013 Nucleocytoplasmic transport
114385300
03015 mRNA surveillance pathway
114385300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114385300
03041 Spliceosome [BR:
gsj03041
]
114385300
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114385300
TREX complex
114385300
Spliceosome [BR:
gsj03041
]
Complex C
Other components
EJC/TREX
114385300
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114385300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_9
Motif
Other DBs
NCBI-GeneID:
114385300
NCBI-ProteinID:
XP_028201118
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All DBs
Position
2:complement(8285807..8288251)
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AA seq
266 aa
AA seq
DB search
MAGGIDMSLDDIKKRSAAAVASRRRFTVVHNPARTTPYPIPQCLIGCQVRQQSMVALFPE
MVLEESGAAKIESGTKLYLSNLDHGVTNDDIKLLFSEEGELKSYTIHYDQSGRSKGTAEV
VFVRHSDALLAIKKYNNMRLDGKPLQIELVGTSLATPAVAPLCQNNLMGRPNDVHFSTRG
RVGDSGFHNDFAQGYLPRGRGEEKDHIRKVSFRDLDHSFERFHRTQSQRSYAKVNGNFGK
VTAKDLDDDLERYHLEAKRIKKQNGK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggcatcgacatgtccctcgacgacattaagaagcgttcagccgccgccgtg
gcttctcgccgccgattcacggttgttcacaacccggccagaacgacgccgtacccgatt
ccgcagtgtttgattggttgtcaggtaaggcaacagagcatggttgcattatttccagaa
atggttttggaggagtcaggtgcggctaagattgaaagtggcaccaagctctatttatct
aacttggatcatggagttaccaacgatgatatcaagctgctgttctcggaagagggtgaa
ttgaaaagctacactattcattatgatcagagtggaagatcaaagggaactgcagaagtt
gtgttcgtgaggcattctgatgctttattagccatcaagaaatacaacaatatgaggctt
gatggaaagccattgcaaattgagcttgttggaacaagtttggctactcctgctgtcgct
cctctttgtcaaaataacttgatgggaagaccaaatgatgtccattttagcacacgagga
agggttggcgatagtgggtttcacaatgactttgcacagggctaccttccaaggggccgt
ggagaagagaaggaccatattcgaaaggtgtcttttagagatcttgatcatagctttgag
aggtttcaccgcactcagagtcagagaagctacgcaaaagtaaatggcaattttggaaag
gtgactgctaaagatcttgatgatgacttggagaggtatcacttagaggctaagcggatt
aaaaagcaaaatggaaagtga
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