Glycine soja (wild soybean): 114385315
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Entry
114385315 CDS
T06057
Name
(RefSeq) THO complex subunit 5B-like isoform X1
KO
K13174
THO complex subunit 5
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114385315
09122 Translation
03013 Nucleocytoplasmic transport
114385315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114385315
03041 Spliceosome [BR:
gsj03041
]
114385315
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114385315
Spliceosome [BR:
gsj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114385315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
MYRF_ICA
Sel_put
Motif
Other DBs
NCBI-GeneID:
114385315
NCBI-ProteinID:
XP_028201137
LinkDB
All DBs
Position
14:complement(7257277..7260920)
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AA seq
509 aa
AA seq
DB search
MEDGDTTEEAVVVPVSIGDEQPFPHSLSRHRDSEEESPHETLRDTKASIENIVAEILSLK
NQGKPKPLLTLRLRELLTQTFLHFVTLRQANRSILMEEERARTETERAKAPLELATHQLQ
NLTYEKSQFVKAIKACNDSKSKYPDIEVVSEEEFFRDAPQDMKDSVLSNHSEHNVVLKRL
NFELFQLYFIFTILYQRKELCKLHDKLEQKIKTLLETIASRKKFLSSLPSLLKSLKKASL
PVQNQLGVQHTKKLKQHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIIGSVKDAQAFA
HHQAHKETGISITVESPKLENDEPNEEDGQRQSKRPRRFQGKESLDQEGIFQIHPLTVNL
HVYDDEISDLESAKLTTLKFEYLMQLNIICVGNKASNDGPENDILSDLFPDDTGLELPHQ
SAKLFVGDAIMFNGDRTSRPYKWAQHLAGIDFLPEVAPLLLASRETSDSDEAAKGEEFIT
SLSQYRQQSRLQTVLQKIRSGRKAQLALQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggcgatacgacggaggaggcggttgtcgttccggtctccatcggcgacgag
caaccgtttcctcattctttgtcacggcaccgcgattcggaggaggaatctccgcatgaa
acgttgcgtgacacgaaagcctcaatagagaacatcgtggccgagattctctctctgaag
aaccagggaaaacccaaaccactcctcactctccgactcagagagctcctcactcaaacg
ttccttcacttcgtcactctccgccaggcaaatcgctcgatcttgatggaggaggagcgt
gcgagaacggaaacggagcgtgcgaaggcgcctctggaactcgccacacaccagcttcag
aacctgacttacgagaagagtcaattcgtgaaagcgataaaggcgtgtaacgattccaag
tcgaagtatcctgatattgaagtggtgtcggaggaagagttttttcgcgatgcgccgcag
gatatgaaggattctgttttatccaatcacagtgagcataatgtcgttcttaagaggctc
aattttgagctgttccagttatactttatatttacaatattatatcagcgcaaagagctt
tgcaaacttcatgacaaactggaacagaaaattaaaacccttctggagacaattgcaagc
cgaaagaagttcttatctagcctcccttcacttctcaagtctcttaagaaagcatccttg
ccggtgcaaaatcaattaggagttcagcatactaagaaactaaagcagcatcattctgca
gagttgcttccaccacctctttatgtgatttactcacagctgttggctcaaaaggaggcg
tttggagaatctattgatgtggagattataggaagtgtcaaagatgctcaagcttttgcc
catcatcaagctcacaaggagactggcatttccatcactgtggagagtcccaaattggaa
aatgatgaacctaatgaagaagatggtcagagacagagtaaaaggccaaggaggtttcaa
ggcaaggagagccttgaccaggaaggaatatttcaaattcacccacttactgtcaatctc
catgtgtatgatgacgagatttctgatcttgagtctgcaaaactcactactctaaagttt
gagtacttgatgcagttgaatattatatgtgttggaaacaaagcatctaatgatggtccc
gagaatgacatcttaagcgatttattccctgatgacacaggtcttgagcttcctcaccag
tcagctaagctctttgttggggatgctataatgttcaatggtgatagaacttcacgtcct
tacaaatgggctcagcacttagcgggtattgatttcttgcctgaggtggctcccttgctg
cttgctagccgtgaaacttcagacagtgatgaagcagccaaaggtgaagaattcataact
agtctttcacaatatcgccagcaaagccgattacagacagttctgcaaaaaattcgatca
gggagaaaagctcagttggctcttcaataa
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