Glycine soja (wild soybean): 114385494
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Entry
114385494 CDS
T06057
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
114385494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114385494
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
114385494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
114385494
NCBI-ProteinID:
XP_028201402
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Position
14:complement(50408280..50416458)
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AA seq
926 aa
AA seq
DB search
MPRRGGGSQRKKQPLASTSENQTGAQQNSEGGNRFQSPSDNGTLTEISREAVGNLIRRAN
KVGISRKKKTPEFEPEQNGTQVLAPMLKQKTSEIGHCGRNSMENASAEEKCGNSGLHCFD
NKEELDDSDWEDGTVARDDHPVTIELNMTAHSTVQKQIRRASAEDKDLAELVHKIHLLCL
LARGRLIDNACDDPLIQASLLSLLPAQLLQLSNVTKLTSNALYPLISWFHDNFHVKNCTN
RETSPHFGLASALESHEGSSEEIAALSVALLRALNLTARFVSILDVAPLKPVQVASGSSN
GIFKTSTPMISKRKLDFKSPQESISCNEIENVCESSLVHSRKSKKCHATNHTDQSSDPPV
VDVRNDSVANSKASETRDSNSELCLTDKSHKSKRKGDIEFEMQLEMALSATTVECKDSKT
EASANPDSSSFSCPSKRVKRVIGEDSSTSPQVISTAIGSMKVGSPLYWAEVYCSEENLTG
KWVHVDALNLIIDGEDKVESMVAACKTSLRYVVAFAGQGAKDVTRRYCMKWYKIASHRVN
STWWDSVLKPLRDLESGATGGVAHLGTNQIISTESNMNDSVVPTRSSIEDIELETRALTE
PLPTNQQAYKSHPLYAIEKWLTKYQVLHPKGPVLGFCSGHPVYPRTCVQTVKTKERWLRE
GLQVKPNEHPVKDLQRSMKPQKVQDSEADDYGCTDSIEQIKLYGKWQLEPLNLPHAVNGI
VPKNERGQVDVWSEKCLPPGTVHLRFPKAFSVAKRLEIDYAPAMVGFEFKNGRSYPVFDG
IVVCAEFKDVLLEAYAEEEERRQAEEKKRDETQALSRWYQLLSSIVTRQRLNNRYINNSL
SSDKLTGVLCINNDESSATVCDNNDKSPNQRDQQVDKCDTNVDVSLSTSVKDHEHVFLKE
YESFDEGTSLLTKRCQCGFSVQVEEL
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcagaggaggcggttctcagcggaagaagcaacccttagcttcaacctcagaa
aatcaaactggggcccagcaaaactcagaaggtggaaacagatttcaatcacctagtgat
aatggaacactgaccgaaatatctcgagaggctgttggaaatcttatacgccgtgctaat
aaagttggcatttccaggaaaaagaagacgcctgagtttgagccagaacaaaatggaacc
caagtcttggctccaatgctcaaacaaaagacttcagagattggacattgtggtagaaat
tccatggaaaacgcttctgcagaggagaaatgtggtaattcaggcctgcactgcttcgat
aacaaggaagaactggatgactcagattgggaagatggtacagttgccagggatgatcat
cctgtgacaattgaattgaatatgaccgctcattcaactgtacagaaacaaattcgtcga
gcttctgctgaagataaggacttggctgaacttgtacacaagattcatttgctttgttta
cttgctcgaggaagattaatagacaatgcttgtgatgatcctcttattcaggcttctttg
ctttctctacttccagcacagttgctccagctatcaaatgtcacaaaactcacctcaaat
gctctatatcctttaatatcatggttccacgataatttccatgttaaaaactgtacaaat
agagaaacttctccgcactttggtctggcatcagctttggaatcacatgaaggtagttct
gaagagattgcagctttatcagtggctctattaagagctttaaatcttacagccaggttt
gtgtccattttggatgttgcccctcttaaaccagttcaagttgcaagtgggtctagtaat
ggcatatttaaaacttctacaccaatgatatctaagcgaaaattggattttaagtcacct
caagaatcaatatcttgtaatgagatagaaaatgtctgtgaaagttctcttgtgcattca
cggaaaagtaagaaatgtcatgcgacaaaccacacggatcagtctagtgatcctcctgtt
gttgatgtaagaaatgatagtgttgctaactcaaaagcttcagagacacgagatagtaac
tcggaattgtgtctcactgacaaatctcataaatcaaagaggaaaggggatattgaattt
gagatgcagttggaaatggctctttctgctacaacagttgaatgtaaggacagtaaaact
gaggcaagtgcaaatcctgattcatcgagtttttcttgtccatcaaaaagagtgaaaagg
gttatcggtgaagactcttcaacctccccccaagtaatttctacagcaattggatcaatg
aaagtaggatctcctctgtattgggcagaagtatattgcagtgaagaaaatttgactgga
aagtgggtgcatgttgatgctttgaatttgattattgatggagaggacaaggttgaatcc
atggtagcagcatgcaaaacatctttgagatatgttgttgcttttgctgggcaaggggcc
aaagatgtgacccgcaggtactgtatgaagtggtacaagatagcatcacatcgagttaat
tcaacatggtgggattcggtgttgaaaccattgagagacttagagtctggggcaactgga
ggtgtggctcatttaggaacaaaccaaatcatttctacagaatccaacatgaatgattct
gttgtccctacaaggagctctattgaggatattgagttggaaaccagggcattaactgaa
cctcttccaaccaatcagcaggcctacaaaagtcatccactttatgccatagaaaaatgg
cttacaaagtatcaagtacttcatccaaagggtccagttctgggcttttgttcaggtcac
ccagtttaccctaggacttgtgtgcaaacagttaagacaaaagagagatggctgcgggaa
gggctgcaggttaaacccaatgaacatcctgtgaaggatcttcaacgttccatgaagcct
caaaaagtacaagattctgaagctgatgactatggctgcactgattctattgaacaaatt
aaactttatgggaagtggcaactggaaccattaaatctacctcatgctgtgaatgggata
gttcccaagaacgagcgaggtcaagtagacgtttggtctgagaaatgtcttccgccaggg
actgtacacttaaggtttccaaaggcattttctgttgccaagagacttgaaattgattat
gcacctgctatggttggttttgaatttaaaaatggccgttcatatcctgtctttgatggt
attgtggtgtgtgctgagttcaaggatgtactgctagaggcatatgcagaggaagaagaa
aggcgacaagctgaagaaaagaaacgggatgaaacacaggcccttagtcggtggtaccag
cttctttcttctatcgtaactcgtcaaaggttaaataatcgttatattaataacagtttg
tcttcagacaaactaactggtgtcctatgtataaataatgatgagtcaagtgcgacagta
tgcgataataatgacaagagtccgaaccaaagagaccaacaggtggacaaatgtgatact
aatgttgatgtttcattaagcacttcagtaaaagatcatgagcatgtgtttttgaaagag
tacgaaagctttgatgagggaacttctctattgacaaagcgatgtcaatgtggattttca
gtccaagtagaagaactatag
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