Glycine soja (wild soybean): 114386211
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Entry
114386211 CDS
T06057
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
gsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114386211
09123 Folding, sorting and degradation
03018 RNA degradation
114386211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114386211
03041 Spliceosome [BR:
gsj03041
]
114386211
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114386211
mRNA cycle factors
Stress granule specific factors
114386211
Spliceosome [BR:
gsj03041
]
Complex C
Other components
Complex C specific factors
114386211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_3
RRM_7
RRM_RdRP1_2
RRM_MARF1
PABC_AtC3H46
DUF5062
PH_35
Motif
Other DBs
NCBI-GeneID:
114386211
NCBI-ProteinID:
XP_028201990
LinkDB
All DBs
Position
2:complement(9864425..9869602)
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AA seq
648 aa
AA seq
DB search
MAQVQVPPQNAIPGPNGGGAAGNQFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVC
RDLTSRRSLGYGYVNFSNPQDAARALDVLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFI
KNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGML
LNDKQVYVGPFLRKQERESTADKAKFNNVFVKNLSESTTDDELKNVFGEFGTITSAVVMR
DGDGKSKCFGFVNFENADDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKQRFEQSM
KEAADKYQGANLYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTP
DEASRALLEMNGKMVVSKPLYVTLAQRKEDRRARLQAQFAQMRPVGMPPSVGPRVPMYPP
GGPGIGQQIFYAQGPPAIIPSQPGFGYQQQLVPGMRPGAAPVPNFFVPMVQQGQQGQRPG
GRRTGAVQQSQQPVPMMPQQMLPRGRVYRYPPGRGMPDVSMPGVAGGMFSVPYDVGGMPL
RDASISQQIPVGALATALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTE
VLHLLESPEALKAKVAEAMDVLRNVAQQQAGGTADQLASLSLNDNLVS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttcaggttccgcctcagaatgcgattcccggccccaacggtggtggtgct
gctggaaatcagttcgtgacgacgtcgctttacgtcggagatctcgacccgaacgtcacg
gacgcccagctgtatgatttgttcaaccaattggggcaagtcgtatccgttagggtttgc
agggacttgaccagtaggagatcgctcggttatggttatgtcaactttagcaacccgcaa
gatgctgccagagctttggatgttctgaacttcactcctctcaataacaggcccatccgt
atcatgtattcgcatcgtgatcccagtatccgtaaaagtgggcaaggaaatatatttatt
aagaatttggatagggcaattgaccacaaggcgttgcatgatactttttctacatttggg
aatatcctttcgtgcaaggtagctacagattcatctgggcaatcaaaaggctatggcttt
gttcaatttgataatgaggaatctgcccaaaaggccattgagaagctgaatggaatgctg
ctgaatgataaacaagtgtatgtgggacccttccttcgcaagcaagagagagaaagtact
gctgacaaggcaaagttcaacaatgtttttgtgaagaatctgtcagaatcaaccactgat
gatgaattgaagaatgtttttggtgaatttggaactattactagtgctgtcgtaatgagg
gatggagatgggaaatcaaagtgttttggatttgtgaattttgagaatgctgatgatgct
gctagggctgttgaggctctcaatggcaaaaagtttgatgacaaagaatggtatgttgga
aaagctcaaaagaaatctgaaagggagaatgaattgaaacaacgatttgagcagagcatg
aaagaagctgctgataaatatcaaggggcaaacttgtatgtcaaaaatttagatgatagc
ctcggtgatgataaacttaaggagctgttctccccttttggtaccataacttcttgcaag
gttatgagagacccaaatggcataagtcgtggatcaggatttgttgcattctcaactcct
gatgaggcatctagagcactcttggagatgaatggcaaaatggtggtaagcaaacctctg
tatgtgactctagcccaacggaaagaagataggagagctagactgcaggctcagtttgct
caaatgcgacctgttggaatgccaccatctgtcggtcctcgtgtgccaatgtatccccca
ggtggtccaggtattggtcaacaaatattttatgcccaaggccctcctgctatcattcct
tcccagcctggatttgggtatcaacaacaacttgttcctggtatgaggccaggtgcagct
cccgtgccaaatttctttgtgccaatggttcagcagggacaacagggacagcgtcctggt
ggaaggcgtacaggtgcagtccagcagtcccagcagcccgttccaatgatgccacagcag
atgctacctagggggcgtgtctatcgttatcctcctggtaggggtatgccagatgtttct
atgcccggggttgctggaggtatgttttctgttccatatgatgtgggtgggatgccgctg
cgtgatgcatcaatctcccagcaaattcctgttggggctttagcaacagctctggctaat
gcttctccagagcagcagaggacgatgctgggtgagaatctctacccccttgtggaacag
ttagagcctgacaatgctgccaaagtgacaggcatgcttcttgagatggaccagactgaa
gttctgcatttgctcgagtcgccagaagccctgaaagcaaaggtggcggaggcaatggac
gtcctaagaaatgttgctcagcaacaggctggcggtactgcggatcagctggcttcatta
tctcttaatgacaaccttgtttcttaa
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