Glycine soja (wild soybean): 114387000
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Entry
114387000 CDS
T06057
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114387000
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
114387000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_12
TPR_8
TPR_14
TPR_17
TPR_16
TPR_CcmH_CycH
TPR_6
TPR_11
TPR_7
TPR_9
ANAPC3
ARM_TT21_N
ARM_TT21_C
TPR_Slam
TPR_10
ARM_TT21_5th
Fis1_TPR_C
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
114387000
NCBI-ProteinID:
XP_028202893
LinkDB
All DBs
Position
15:16760529..16785794
Genome browser
AA seq
1088 aa
AA seq
DB search
MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYR
QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD
SLELYKRVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIM
DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS
ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL
ILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVW
LSFINEENKSSIDAATSTLQFKDMQLFRDLESNGHHVEVPWDKVTVLFNLARLLEQLYDS
GTASIFYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLGE
LELKNDDWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAK
ELCTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA
HVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAP
SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFD
EKKIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKFQM
ERRKQEDELKRVQQQEEHFRRVKEQWKSSSLSKRRERSDDEEGGTGEKKRKKGGKRRKKD
KHSKLRYDAEEPEDDLMDEQGMEDEEADINYREEPQTQMNDDAEENAQGLLAAAGLEDSD
ADEETAAPSSSIARRRQALSESDDDEPLLQRQSSPVRQNSADMQLSDGEIRDGDKTNGDD
GNDEEKQY
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtttacataccggtgcagaattcggaggaggaggttagggttgctctcgac
cagcttccgagggacgcctccgacatcctcgacatcctcaaggccgaacaagcccctctc
gatctctggctcatcattgcgagggagtacttcaagcagggaaaaattgatcaatatcgc
cagattttggaggaaggatccagtccagaaattgatgagtattatgctgatgtcagatat
gagaggattgctatcttaaatgcccttggagcttactacagctaccttggaaaaatagag
acaaaacaaagagaaaaggaggagcatttcattttggcaacacagtattacaataaagca
tctaggattgacatgcacgagccctccacttgggttgggaaaggtcagcttttgctagca
aagggtgaagtagaacaggcgtctgctgcatttaagattgtgttagatggagaccatgat
aatgttcctgctcttttgggccaggcatgtgttgagttcaaccgcggccgattttctgat
tcacttgagttgtataagagagtattgcaagtgtatcccaattgcccagcagctgtgaga
cttggcataggtctatgtcgctacaaattaggtcaatttgagaaagctcaacaggcattt
gagcgtgttttacagctagatccagaaaatgttgagtctctcattgcccttgcaataatg
gatttgcgtactaatgaagctactggaatcaggacgggaatggtaaaaatgcagagggca
tttgagatatacccatactgtgcaatggctctgaattatcttgcaaatcatttcttcttc
actggacaacattttttagtagagcaactgactgaaactgcattggccgttactaatcat
ggcccaacaaagtctcactcttactacaatttagcacgctcataccatagcaagggagac
tatgacaaagctggggtgtattacatggcatctgtcaaggaagtaaacaaaccccatgaa
tttgtgtttccttattatggtttgggacaagtgcagataaagttgggagattttaaaagt
gcactctcaaactttgaaaaggtcttggaagtgtacccagataattgtgagacattgaaa
gcacttgggcatatatatgttcaacttggtcaaactgacaagggccaggactttattagg
aaagccacaaagattgatccccgtgatgcccaggcgtttcttgagctgggagaattgtta
attctttctgacacaggagctgcactggatgcattcaaaactgctcatactctatttaag
aagggaggtcaagaagtaccaattgaattactcaataatattggcgtgcttcagtttgaa
aggggggaatttgagcttgctcgacaaacatttaaggaggcactaggtgatggtgtttgg
ctatctttcatcaacgaggaaaataagtcttccattgatgctgctacttctactcttcaa
ttcaaggacatgcaattatttcgtgaccttgaaagcaatggtcaccatgtggaagtacct
tgggataaagtcactgtactatttaacttggctaggttacttgagcagttatatgattct
ggaactgcaagcatattctatcgccttatcttgttcaagtatccagactatattgatgca
tatctgaggctagctgcaattgcaaaagctcggaacaacattctgttaagcattgaactg
gttaatgatgccttgaaggtgaataacaagtgtcccaatgcattatctatgcttggtgag
ttggagttgaaaaatgatgattgggtaaaggcaaaagaaactctccgcacagctagtgat
gcaactgatggcaaggactcatatgctactctttctctgggaaactggaattactttgca
gcagttcgcaatgagaagagaaatccaaagctagaagctactcatttggaaaaggccaaa
gaactttgtaccagagttctgattcagcattcttctaatttatatgctgccaatggtgct
gcggtagtcttagcagaaaagggccattttgatgtgtcaaaggatatctttacacaggtt
caagaagctgccagtggtagtgtttttgtccagatgcctgatgtttggataaatctggca
catgtttattttgctcaggggaattttactttggctgtgaaaatgtatcaaaactgcttg
cggaagttttatcataacacagactctcaaatacttctatatttagctcgtacacattac
gaggctgaacagtggcaagactgtataaaaactctactgagggccatacatttggcaccc
tcaaactataccttaaggtttgatgcaggggttgcaatgcaaaagttttcagcatcaaca
ctacaaaaagcaaagaggactgcagatgaggtaagagcaactgttgctgagcttcaaaat
gctgttcgtgtatttagtcagttgtctgctgcttccaatctacatattcacgggtttgat
gagaagaaaattgacactcatgttggatactgcaaccacttactttcggctgcaaaagtt
catcttgaagcagctgagcatgaagagcagcaagtacggcaaagacaagaacttgctcgt
caggttgcattggctgaggaagcccggcgaaaggctgaagagcaaaggaaatttcagatg
gaaaggagaaaacaagaagacgagctaaagcgtgtgcaacaacaggaggaacattttagg
cgtgttaaggagcaatggaagagcagcagtctttcaaaacggagagaaagatcagacgat
gaagagggagggactggtgagaagaagagaaaaaaaggtggaaaacggagaaaaaaggat
aagcactctaaattgcgctatgacgcagaggaaccagaagatgatttgatggatgaacag
ggaatggaggatgaagaagctgatataaactacagagaggagccccaaactcagatgaat
gatgatgctgaggaaaatgctcagggtcttcttgcagcggctgggcttgaagattctgat
gcagatgaggaaacagctgcaccttcctcaagcatagcccgacgaaggcaagcattatcg
gaatctgatgatgacgaaccattattacaaaggcagtcaagtccagtaagacaaaactct
gctgatatgcagttgagtgatggagaaataagggatggggataagacaaatggagatgat
ggcaatgatgaggagaaacaatattga
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integrated database retrieval system
