Glycine soja (wild soybean): 114387435
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Entry
114387435 CDS
T06057
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Module
gsj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114387435
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
114387435
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114387435
NCBI-ProteinID:
XP_028203424
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Position
15:696271..700631
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AA seq
425 aa
AA seq
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MLYNINFEGVNLLMLLKSTAKFDIMEFFFIVLMILSVLTPGLSSTIITFNVLQYGAVGNG
QTNDSPAFLKAWKAACQSKSHIARLIIPAKRTFLLKPTTFSGPCKSNYTYIQLSGNIVAP
KTKSEYSGFHTNTWLGFSFVNGLAISGKGTIDGRGSAWWQQPCVGNPQPGATCRPPTAVT
FNRCNRLQLKGYTSINPARSHVTLTSCNKGIISNIRLIAPGTSPNTDGIDISGSTGIQVL
NSFIATGDDCIAISAGSSKIKITGITCGPGHGISIGSLGTRGDTDIVEDVHVENCTLTET
LTGVRIKTWQGGAGYARRITFENIRFVRANSPIIIDQFYCPHRSDCQNQTRAIKISDVTY
KGIVGTSLTDKAINLSCDQNVGCSNIVLDHVYITPAVPGQKVFSYCHNAHGIATHTKPSV
KCLLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctatataacataaactttgagggtgtcaatcttttgatgttgctcaagagcactgca
aagtttgatataatggagtttttcttcattgtgttaatgattctgagtgtgcttacaccc
ggattgagcagcacaataattactttcaatgtgttgcagtatggagcagttggaaatgga
caaaccaatgattccccagcctttctgaaggcgtggaaagccgcgtgccagagcaagtca
catatagctcgcctcatcataccagcaaaacggacattcttgctgaagcctactaccttc
agtggtccatgcaaatctaattatacctacattcagctttcagggaacattgttgcacct
aaaacaaaatcggaatattctggattccacacgaacacatggcttggcttttcattcgtc
aatggtttagctatcagtggaaaagggaccattgatggtcgaggctctgcctggtggcaa
cagccttgcgtaggaaatccacaacccggagcaacgtgccgtccaccaacagcagtaact
ttcaatagatgcaatcgtcttcaactgaaaggatatacaagcattaatcccgcaagaagc
cacgtgactctaacaagctgcaacaaaggcataatctctaacatccgtctaattgctcct
ggaacaagccctaacaccgatggcattgatatttcaggctcaacaggcattcaagtactt
aattcttttattgcaacaggtgatgattgcatagctattagtgctggatcctccaagatc
aaaataactggtataacatgtggtccaggccatggtatcagcattggatcattgggaaca
cgtggagataccgacattgtagaggacgtgcatgtggagaattgtactttgaccgaaaca
ttaactggagtaagaatcaagacatggcaggggggagctggatatgctaggaggatcacg
tttgaaaatattaggtttgttcgagcaaatagccccattatcattgaccaattttattgt
cctcatagatcggactgccaaaaccagactcgagcaatcaagataagtgatgtaacatat
aaaggaattgttggaacatcattgacggacaaggcaatcaatttgagctgtgaccaaaat
gtaggctgctccaacattgtgcttgatcatgtttatataactcccgcagttccagggcag
aaggttttttcctattgccataatgcacacggaatagccacccacaccaaaccatccgta
aagtgcttgctgaagtag
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