Glycine soja (wild soybean): 114388065
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Entry
114388065 CDS
T06057
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03015
mRNA surveillance pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114388065
09122 Translation
03013 Nucleocytoplasmic transport
114388065
03015 mRNA surveillance pathway
114388065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114388065
03041 Spliceosome [BR:
gsj03041
]
114388065
03009 Ribosome biogenesis [BR:
gsj03009
]
114388065
03012 Translation factors [BR:
gsj03012
]
114388065
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114388065
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114388065
mRNA cycle factors
Stress granule specific factors
114388065
Spliceosome [BR:
gsj03041
]
Complex C
Other components
EJC/TREX
114388065
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
90S particles
Helicases
114388065
Translation factors [BR:
gsj03012
]
Eukaryotic type
Initiation factors
eIF-4
114388065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
TniB
Motif
Other DBs
NCBI-GeneID:
114388065
NCBI-ProteinID:
XP_028204199
LinkDB
All DBs
Position
15:complement(13455856..13460106)
Genome browser
AA seq
406 aa
AA seq
DB search
MATTSVVPANRRRAAKPAEEMDFETTEGVKAIASFEEMGIKDDLLRGIYQYGFEKPSAIQ
QRAVTPIIQGRDVIAQAQSGTGKTSMIALTVCQVVDTSVREVQALILSPTRELASQTEKV
ILAIGDFINIQAHACVGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKMLV
LDESDEMLSRGFKDQIYDVYRYLPPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVS
SMHGDMPQKERDAIMGEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacgtcggtggtgccggcgaaccggcgtcgcgcggcgaagcccgcggaggag
atggacttcgagacgacggagggcgtgaaggccatcgcaagcttcgaggagatggggatc
aaggacgatctgctccgcggaatctaccagtacggcttcgagaagccctccgccattcag
cagcgggccgtcacgcccatcattcagggccgtgacgtcatcgctcaggcccaatccgga
acggggaaaacgtccatgattgctctcaccgtttgccaggtcgtcgatacctccgtcaga
gaggttcaggcattgatattgtcaccaacgagggaactggcctcacagactgagaaagtt
atattggctattggggatttcattaatatacaagctcatgcatgcgttggtggtaaaagt
gtgggagaagatataaggaaacttgagtatggagttcatgtggtgtctggaactcctggc
cgagtttgtgacatgatcaaaaggagaacattgcgcacgagagctatcaagatgctagtt
cttgatgaatctgatgaaatgttgagcagagggtttaaagatcaaatttatgatgtgtat
agatatctcccacccgaccttcaggtttgcttgatttctgctacccttcctcatgaaata
ctggagatgacaaacaaattcatgacagatccagtaaggatccttgtaaaacgtgatgaa
ttgacattggagggcatcaaacaattttttgttgccgttgaaagggaggaatggaagttt
gataccctgtgtgatctttatgataccctcactatcactcaagctgttatattctgtaac
actaagcgaaaggtggactggttaactgaaaaaatgcgtaacaataatttcactgtctca
tcaatgcatggtgacatgcctcagaaagaaagagatgctattatgggagaatttcgtgct
ggaacaacccgtgtactaataacaactgatgtttgggcccgtggtcttgatgtacagcag
gtttctctagttatcaattatgaccttccaaataatcgtgagctttacattcatcgaatt
ggccgttctggacgttttggaagaaagggtgttgcgataaattttgtgaagagcgatgac
atcaagatcttgagagacattgaacaatactacagtactcagattgatgaaatgccaatg
aatgttgctgatcttatataa
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