Glycine soja (wild soybean): 114388318
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Entry
114388318 CDS
T06057
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114388318
03015 mRNA surveillance pathway
114388318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114388318
03041 Spliceosome [BR:
gsj03041
]
114388318
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114388318
Spliceosome [BR:
gsj03041
]
Complex C
Other components
EJC/TREX
114388318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Patatin
Motif
Other DBs
NCBI-GeneID:
114388318
NCBI-ProteinID:
XP_028204536
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All DBs
Position
15:3834204..3838069
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AA seq
426 aa
AA seq
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MGSTAVEKTEEELRNEIDELLRQQREITERLRDPRGLRRGSLAGPALPSNGARQRPFIRP
VTGDRNDSEDQPPAKRRLSSAVVKVDDGELPEDAGAGQDGKTKDSANEADNGTAAVVQND
SNPFNSHQTVWSKRDNNQRTSKASDIPTTEHVPRVLPKNEDPSLVNRNKRMLGQLLGTLE
KFRKEDKQLSGTEAYMRRSSSLQRAEQRAREESERLRKEEREQIAEKRRRDLTLRARVAA
KTEEKKLELLFLQWTEHHKRLSNFTRTKAEPPIYYLPNKPLDEDPTLLEKSKEEAFLEWK
NARREEVSEYQKQIGEQYLANVEKELERWQNARNARKVNNDQNLQETMDKELDTHRLEHG
PKKRKIPDENNNDDDDDVEDINVGEDDMMDDELDDDSSRRIDETTKTEAGSASSDPAADA
DNAGGK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggggagcacggcggtggagaagacggaggaagaactccgcaacgagatcgatgagctt
cttcgccaacagcgcgagattacggagaggcttcgagatcctcgaggtcttcgcagaggt
tccttggcgggtcctgctctcccctctaacggtgctcgccaacgaccctttattcgtcct
gttactggagacaggaatgattctgaagatcaacctcctgctaaacgtcgactttcatct
gctgtcgttaaggtggatgatggggagttgcctgaagatgctggtgcaggacaggatggg
aagacaaaggattcagctaacgaagctgacaatgggactgctgcagtggtccaaaatgat
agcaaccctttcaattctcaccaaactgtatggtctaagagagataacaatcaaagaact
tcaaaggcttctgacattcctactacggaacatgttccaagggtattgccaaagaacgag
gatccaagtttggttaataggaacaaaagaatgttgggccagcttttgggaactctcgag
aaattcagaaaggaagacaagcaactctcaggaacagaggcatatatgcgaagatctagt
tccttgcaaagagctgagcaaagggcacgtgaagaaagtgaaaggctcaggaaagaagag
cgtgaacagattgctgaaaaacgaaggagagacttgactcttagggctcgtgtggctgct
aagacagaagaaaagaaattggagctgctgtttcttcagtggactgagcatcataaaaga
ctaagcaattttacaaggactaaagcagaacctccaatctactatttgcctaacaagccc
ttggatgaagatcctacattacttgagaagagcaaagaagaggcttttctagaatggaag
aatgcaagaagagaggaagtgtccgagtatcagaaacagattggggagcagtatcttgcc
aatgttgagaaggaattggagagatggcagaatgcaaggaacgcaaggaaagttaacaat
gaccagaatttacaggagacaatggacaaagagttggatactcataggctggagcatggt
cccaagaaaagaaagatccctgacgaaaacaataatgacgacgatgatgatgtggaagat
ataaatgtgggagaggatgacatgatggatgatgaattagacgatgattctagtaggagg
attgatgaaacaaccaagacggaagcaggtagtgccagttcagatcctgcagctgatgct
gataatgcgggagggaagtga
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