KEGG   Glycine soja (wild soybean): 114388400
Entry
114388400         CDS       T06057                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03018  RNA degradation
gsj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114388400
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114388400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114388400
   03041 Spliceosome [BR:gsj03041]
    114388400
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     114388400
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     114388400
Spliceosome [BR:gsj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    114388400
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 114388400
NCBI-ProteinID: XP_028204672
LinkDB
Position
15:48505695..48509194
AA seq 98 aa
MSAGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEELDSSLDLSKLRAHPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcagctgggcctggacttgaatctcttgtagatcagacaatttcagtcattacaaat
gatggacgaaatatagtgggagtcctgaaaggttttgatcaggcaacaaatataattctt
gatgagtcccatgaacgagtttattctaccaaggaaggtgtacaacaacttgttcttggt
ttatacatcatcaggggtgacaacataagtgttgttggtgaactagatgaagaactggat
tctagtctggatttgtcaaaactcagagctcatcccttgaaacctgttatccattga

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