Glycine soja (wild soybean): 114388406
Help
Entry
114388406 CDS
T06057
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsj01009
]
114388406
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114388406
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
114388406
Protein phosphatases and associated proteins [BR:
gsj01009
]
HAD phosphatases
Fcp/Scp phosphatases
114388406
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
114388406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Dicer_dsRBD
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
114388406
NCBI-ProteinID:
XP_028204684
LinkDB
All DBs
Position
15:5496928..5505758
Genome browser
AA seq
958 aa
AA seq
DB search
MKRSMVYHGEMEVGEVEIYPEEKKNIDLKEIRISHFSQPSERCPPLAVLHTITSFGICFK
MESSTSQTRQQQDVLFHLHSSCIRENKTAVMPLRGEEIHLVAMYSRNNDRPCFWGFIVAS
GLYNSCLTMLNLRCLGIVFDLDETLVVANTMRSFEDKIEVLHRKMNSEVNPQRISAMQAE
IKRYLDDKNILKEYAENDQVVDNGKVIKIQSEIVPALSDSHQPIVRPLIRLQEKNIILTR
INPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVFVCTMAERDYALEMWRLLDPELNLI
NSKELIDRIVCVKSGLKKSLFNVFQNGLCHLKMALVIDDRLKVWDEKDQPQVHVVPAFAP
YYAPQAEASNAVPTLCLARSVACNVRGGFFKDFDDGLLQKIPLIAYEDDIKDIPSPPDVS
NYLVSEDDASASNGNKNLLLFDGMADAEVERRLKGAISASSTVPAMTTNLDPRLAFNSSL
QYTMVSSSGTVPPPTAQASIVQFGNVQFPQPNTLVKPMCQVTPPGPSLHSSPAREEGEVP
ESELDLDTRRRLLILQHGQDTREHTSSEPPFPVRHPTQVSAPSVPSRRGWFSVEEEMGPQ
QLNQLVPKEFPVGSEPLHIEKRWPRHPSLFSKVDDSVSSDRVFHESHQRLPKEVHHRDDH
SRLSQSLSSYHSFPGDDIPLSGSSYSNRDFDSESGRSLFHADITTGVLQEIALKCGTKVE
FLSSLVANTALQFSIEAWFAGKKVGEGFGRTRREAQNKAAECSIKQLADIYMSHTKDDSG
STYGDVSGFHGSNNNGFVSSGNSLGNQLLPKESVSFSTSSDSSRVSDPRLEVSKRSTDSI
SALKEFCMMEGLAANFQSSPAPASTHFAQKDEVHAQVEIDGQIFGKGFGLTWEEAKMQAA
KKALESLRTMFNQGTRKRHGSPRSMQGLANKRLKQEYPRTLQRIPYSARYPRNAPLVP
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtctatggtgtatcatggagagatggaagtgggagaggtggagatataccca
gaagagaaaaagaacatagatctgaaagaaatcagaataagtcacttctcgcaacctagt
gaaaggtgtccaccgcttgctgtgcttcacaccattacttcttttggtatttgcttcaaa
atggagtcatcgacctcacagacacgacaacagcaggatgtcctctttcacttgcactcc
tcatgtatcagagagaacaagactgctgtaatgccacttcgtggggaagaaatacacttg
gttgcaatgtattcacggaacaatgatagaccatgtttctggggatttattgttgcctct
ggactttacaattcatgcctaacaatgttaaatctgagatgtttgggtatagtgtttgat
ctggatgaaacccttgtagttgcaaacacaatgcgttcttttgaggataaaattgaggtg
ctccatagaaaaatgaactctgaggtcaatccgcaacgaatttctgctatgcaggcggag
ataaagcgatacttagatgacaagaatatattgaaggaatatgctgaaaatgatcaagtt
gttgataatgggaaagtgataaaaattcaatctgagattgttccagcattgtctgatagt
catcagcctatagttcgaccactgatccgattacaagaaaagaatattattttgacacgc
atcaatccacagattcgtgatactagtgttcttgtgaggttaagacctgcatgggaagat
cttcggagctacctgactgcaagagggcgcaagcgttttgaggtttttgtttgcacaatg
gctgagagggactatgcactagaaatgtggaggcttcttgatccagaattgaatttgata
aattcgaaagaactgatagatcgtattgtttgtgtcaagtctggtttaaagaaatcgttg
tttaatgtattccaaaatggcttatgccatctgaagatggcattggtaattgatgatcgc
ctgaaagtgtgggatgagaaagaccagccgcaggtgcatgttgtccctgcatttgctcca
tactatgctcctcaagctgaagcaagcaatgcagtccctaccttgtgtcttgcaagaagt
gttgcttgcaatgttaggggtggcttcttcaaggattttgatgatggtcttttacagaag
atccctctaattgcttatgaagatgatatcaaagatataccttctcctcccgatgtgagc
aattatctagtttcggaggatgatgcatctgcttccaatggaaataaaaatttgcttcta
tttgatggcatggcagatgctgaggtagaaagaagattaaagggtgcaatatcagcttct
tcaactgtccctgcaatgaccactaatctagatcctaggcttgctttcaattcttctctt
caatacacaatggtgtcttcttctggaactgtcccacccccaacagcacaagcatctata
gtgcaatttggcaatgttcagtttcctcaacctaatactctagttaagccaatgtgtcaa
gttacccctccaggaccgagcttgcatagttctccggccagagaagagggtgaggtacct
gaatcagaattagacctagataccaggcgtaggcttctcatattgcaacatgggcaagat
acaagggagcacacgtcaagtgaacccccatttcccgtcagacaccccacacaagtttct
gctcccagtgtcccatcacgtaggggatggttttctgtagaagaggagatgggtccacaa
caactaaatcagttagtacccaaagaatttcctgtaggttctgaaccattgcatattgag
aagcgctggccccgtcatccatcccttttctctaaggttgacgattctgtttcctctgat
agagttttccatgagagccaccaaagattgccaaaggaggtgcatcatagggatgatcac
tcaagattaagccaatcactctctagttatcattctttcccaggtgatgacattcccttg
agtggttcatcttacagcaacagggattttgactctgaatctggacgttctctatttcat
gctgatattacaactggagtattacaggaaattgcactgaagtgtggaactaaagtggaa
tttttgtcttcgttagtggctaacacagcactgcaattctccattgaggcatggtttgct
ggaaaaaaagttggtgaaggatttggtagaactagaagggaagcccaaaataaggctgct
gagtgttcaatcaaacaattggctgatatatatatgtctcatactaaggatgactctggt
tccacttatggtgatgttagtgggtttcatggttcaaacaacaatggttttgtgagtagt
ggtaattctcttggtaatcagctattgcctaaagagtcagtctcattttcaacttcatct
gactcatctagggtttcagatcctaggttggaagtctctaaaaggtcaacagattcaatt
tctgccctcaaagaattttgcatgatggagggtcttgctgccaattttcaatcttcacca
gctccagcatcaacacattttgctcagaaagatgaagtgcacgcacaggttgaaatagat
ggtcagatctttggtaaagggtttggattaacatgggaagaggctaaaatgcaggctgcc
aagaaggcacttgaaagtctaagaacaatgtttaatcaaggcactcggaagaggcatggt
tctcccaggtcaatgcaaggattggcaaataaacgtctaaagcaagaatatcctcgaact
ctgcagcggattccctattctgctagatatcccaggaatgctcctcttgttccttga
DBGET
integrated database retrieval system
