Glycine soja (wild soybean): 114388567
Help
Entry
114388567 CDS
T06057
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Module
gsj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114388567
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
114388567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
SO2946-like_C
Motif
Other DBs
NCBI-GeneID:
114388567
NCBI-ProteinID:
XP_028204914
LinkDB
All DBs
Position
15:10129455..10135467
Genome browser
AA seq
408 aa
AA seq
DB search
MPNPTTTTKKPSPLSLLALHTLHFLVLCTWFSTSSAKATSYNVVDFGAKPDGATDATAAF
LSAWNKACSSNKPAGIHVPQGRFLIARAVTFHGQCANRAISITIRGTLVAPSQYTFVGNS
LYWLTFDQVSGVSIHGGVLDARGSFLWDCKYKATPNCPIGAATLGFTNSEHIVITGLTSL
NSQLVHILINACHNVKMHGVKLMADGNSPNTDGIHVKFSTDVTILAPRIRTGDDCISVGP
GCRNLWVEDVACGPGHGISIGSLGWDLDEPGVKNVTVRKATFSKTQNGFRIKSWGRPSSG
FVEDVHFEHATMSDVQNPIIIDQHYCPFRNGCPSQASGVKISDISYKDIHGTSATQVAVK
FDCSSEQPCERITLEDIRFTYKINKAPQALCNHAGGTTLGIVQPVSCF
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacccaacaacaacgacaaaaaaaccatctcctctctctcttctcgctcttcac
acattgcacttcttggtcctatgtacctggttctccacatcctcagccaaagcaacctcc
tacaacgtggtggacttcggggccaaacccgacggcgcgacggacgcaaccgcggcattc
ctaagcgcgtggaacaaagcttgtagttcgaacaaacccgcaggcattcacgtgccgcaa
gggaggttcctgatagcacgtgccgttacgttccatgggcaatgtgcgaaccgtgctatc
tccataaccattcgtggaaccttggtggctccttcccaatacacgttcgtggggaattct
ttgtattggttgacctttgaccaagttagtggggtttccattcatggtggggtgcttgat
gcccgaggcagtttcttgtgggattgcaagtacaaagccacccctaattgccctattgga
gctgcgacacttgggttcacaaactctgaacacattgtcatcactgggttgacttctctt
aatagtcaactggttcacatactgatcaatgcatgccacaacgtgaaaatgcatggagtg
aagctcatggctgatggaaacagccctaacaccgatggcatccacgtcaaattctccacc
gatgtcaccatccttgcacctagaattcgaactggagatgattgcatctctgttggccct
ggttgtagaaacttgtgggttgaagatgttgcatgcggacctggtcatgggataagcatt
ggaagcttaggatgggacttggacgaacctggtgtgaaaaatgtgacagttagaaaagcc
acattctctaaaactcaaaatggttttagaataaagtcttgggggaggccaagcagtgga
tttgtggaggatgtccattttgaacatgcaacaatgtctgatgtccaaaaccccattata
attgaccaacattattgcccatttcgcaatggttgccctagtcaggcctctggggtgaag
ataagtgatatttcatacaaagacattcatggaacatctgcaacgcaagttgctgtgaaa
tttgattgtagttctgagcagccatgcgaaagaataacgttggaggatattagattcact
tacaagatcaacaaagctccccaagctttgtgtaatcacgctggtggaaccacattgggt
atagttcaaccggtgagttgcttctag
DBGET
integrated database retrieval system