Glycine soja (wild soybean): 114389018
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Entry
114389018 CDS
T06057
Name
(RefSeq) ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114389018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114389018
03036 Chromosome and associated proteins [BR:
gsj03036
]
114389018
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114389018
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
114389018
Chromatin remodeling factors
BAF complex
114389018
PBAF complex
114389018
GBAF(ncBAF) complex
114389018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
HDA2-3
BipA_C
AAA_14
Motif
Other DBs
NCBI-GeneID:
114389018
NCBI-ProteinID:
XP_028205399
LinkDB
All DBs
Position
16:complement(3266810..3279068)
Genome browser
AA seq
2229 aa
AA seq
DB search
MQSGGGGGGRNPGVGSAGRTTTSSAAASPTSSSSASQLGLDSMQQQQQQQQQQQIGSRQS
FQQQLLRKPEGNEAFLAYQAGIQGVFGSNNFSSPSAMQLPQQPRKLHLGSNQDIQLRGQG
VEQQMLNPVHQAYLQYALHAAQQRPTLGIQSQQQTKMGMLSSASLQDQEMRMGNLKMQDI
MSMQAANQGQGSSSRNSSERGARGDKQMDQGQQMTPDQKSEGKPSTQGPTIGHLIPGNMI
RPMQGPETQQGIQNVVNTQIAVSAQLQAMQAWARERNIDLSHPANAHLMAQLIPLMQSRM
VSQSKVNESNIGAQSSPVPVSKQQVTSPAVASESSVHANSSSDMSGQSGSSKARQTAPSS
HLGSITNAGIAGNSSDMATQQFNVHGRESQAPPRQPVVVGNGMPSMHSQQSSANTNLGAD
HPLNAKTSSSGPEPPQMQYTRQLNQSAPQAGGPTNEGGLGNPAKSQGRPAQMPQQRTNFT
KQQLHVLKAQILAFRRLKKGEGTLPQELLRAIVPPPLEMQAQQPNHSARGQNQDKPAGNI
AAEQISPIESSAKEPQSIPSINGQSSLKHESFARDEKSIVPPVHVQAVAPPVSKESAPTL
SAGKKDQKSIGCSVKSNQDGECVNNTTVRNELALDRGKAIAPQAPVSDTMQIKKPSQTST
GPQPKDVGPTRKYHGPLFDFPFFTRKHDSFGSSMMLNNNNNLSLAYDVKDLLFEEGMEVL
NKKRTENLKKIEGLLAVNLERKRIRPDLVLRLQIEEKKLRLVDLQARLRDEIDQQQQEIM
AMPDRPYRKFVRLCERQRMELARQVQASQRAVREKQLKSIFQWRKKLLEAHWAIRDARTA
RNRGVAKYHEKMLREFSKRKDDDRNKRLEALKNNDVDRYREMLLEQQTSIPGDAAERYAV
LSTFLTQTEEYLHKLGSKITAAKNQQEVEEAAKAAAAAARLQGLSEEEVRAAAACAGEEV
MIRNRFLEMNAPRDSSSVNKYYNLAHAVNETVIRQPSMLRAGTLRDYQLVGLQWMLSLYN
NKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSEFYNWLPSVS
CIFYVGSKDHRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDR
DSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFNDWFSKPFQKE
GPTQNVEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLKCKMSAVQS
AIYDWVKSTGTLRLDPEDEKHKLHRNPAYQVKQYKTLNNRCMELRKTCNHPLLNYPFFSD
LSKEFIVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGT
TSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVAR
AHRIGQKREVKVIYMEAVVDKIASHQKEDELRSGGTVDMEDELAGKDRYMGSIESLIRNN
IQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIAR
SKEEIELFDQMDDELDWIEEMTRYDHVPKWLRANTREVNAAIGALSKRSSKNTLLGGSIG
IESSEFGSERKRGRPKGKKHPNYKELDDEILEYSEVSSDERNEYAHEEGEMGEFDDDGYS
MADGAQTIDKDQLEDGLLCDAGYEFPQSLESARNNQMVEEAGTSGSSSDSQRVRQIVSPS
VSSQKFGSLSALDARPSSISKRMTDELEEGEIAVSGDSHMDHQQSGSWIHDRDEGEDEQV
LQKPKIKRKRSLRVRPRHATERPEEKSGSEMASHLAVQADHKYQAQLRTDPESKLFGDSN
ASRHEQNTPALKNKRTLPSRRVANTSKLHGSPKSSRLNCMSVPSQDAGDHSRESWEGKPI
NSSGSSAHGTKMTEIIQRRCKNVISKLQRRIDKEGHEIVPLLMDLWKRIENSGSGNSLLD
LRKIDQRIDKFEYNGATELVFDVQFMLKSAMHFYGFSHEVRTEARKVHDLFFEILKIAFP
DTDFRDARSALSFSSQAAAGTVTSPRQAAVSQSKRHRLINEMETESYPSQRSLQRGSASS
GENNRIKVHLPQRESRTGSGGGSSTREQQQEDSSLLAHPGELVVCKKRRNDREKSAVKPK
TGPVSPSSMRTPGPSSVPKEARLTQQGSHAQGWAGQPSQQPNGSGGSVGWANPVKRLRTD
SGKRRPSHT
NT seq
6690 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccggtggcggagggggcggccggaaccccggagtggggtcggcggggcggacg
acaacgtcgtcggccgcagcgtcgccgacttcgtcgtcttcagcgtcgcagttggggttg
gactctatgcagcaacagcagcagcagcagcaacaacaacaaataggttctagacagtca
tttcaacagcaactgcttagaaaaccagaagggaatgaagcttttttagcttatcaagca
ggaattcagggcgtatttgggagtaacaatttctcatctcctagtgccatgcaactgcct
cagcagcctcgaaaattgcatcttggttccaaccaggatatccagctaaggggtcaaggt
gttgagcagcaaatgctaaatcctgtccatcaagcataccttcaatatgctctccatgct
gcgcaacaaaggcctactttaggaattcagtcacagcagcaaactaaaatgggaatgtta
agctctgcatctctgcaggatcaggagatgcgtatgggaaatttgaaaatgcaggacatt
atgtctatgcaggcagcaaatcaaggtcaaggatcatcctctaggaattcatctgagcgt
ggtgctcgtggtgacaagcaaatggaccaaggacaacaaatgacacctgatcagaagagt
gaaggaaagccttcaactcagggaccaaccattggacatttaattcctggaaatatgata
agacccatgcaaggaccggaaacacagcagggcatccaaaatgttgtaaacacccagatt
gcagtatctgctcaattgcaggctatgcaggcatgggcacgtgaacgtaatatagactta
tcacatcctgcaaatgcacacttaatggcgcagctcattccactgatgcagtcaaggatg
gtctcacaatcaaaggtcaatgagagcaacattggtgctcagtcatcacctgttcctgtt
tcaaagcagcaggttacttctccagcagttgcaagtgagagctcagtacatgctaattca
tccagtgacatgtctgggcagtcaggctcttcaaaagccaggcagacagctccatccagc
catcttggctcaataacgaatgctggtatagctggtaactctagtgacatggcaacacag
caattcaatgttcatggcagagagtctcaagctcctccgaggcaaccagtagtagttgga
aatggtatgccctctatgcattctcagcagtcttctgctaacacaaacttaggtgcagac
catcctctgaatgcaaaaacttcatcatctggtccagaacctcctcaaatgcagtacacg
aggcagttaaaccaatctgctcctcaggctggaggtccaacaaatgaagggggtttgggt
aatcctgcaaaatctcaaggacgaccagctcagatgcctcagcaacgaaccaattttaca
aagcaacaactacatgttctgaaagcacagatactagcatttaggcggctgaagaaagga
gaaggtactctgcctcaagaacttcttcgggctattgttccaccacctcttgagatgcag
gcgcaacagccaaatcattctgcaagaggacaaaaccaagacaaacctgctggaaatatt
gcggcagaacaaataagcccaattgagtccagtgccaaggagccacagtctatccctagt
attaatggtcagagttctttaaagcatgaatcctttgccagagatgagaaatccattgta
cccccagttcatgttcaagctgttgcaccacctgtgtcaaaggaatctgctccaacgtta
tctgctggaaagaaagaccagaaatcaattggatgctctgttaagtctaaccaggatggt
gaatgtgtaaataatactactgttagaaacgagttagcattagataggggaaaggctatt
gcaccgcaggctcctgtatccgacacaatgcaaattaagaaaccttcacaaacgagcact
ggtccccagccaaaggatgtgggaccaaccagaaaatatcatggacctctatttgatttt
cctttctttactaggaaacatgactcctttgggtcatcaatgatgctaaacaacaacaat
aacttatcactggcatatgatgtcaaagatcttctttttgaggaaggcatggaagtactt
aacaagaaaaggacagaaaatttaaaaaagattgaaggtttattggcagtaaacttagag
aggaaaagaattaggccagatcttgtgctgaggctccaaattgaagagaaaaagcttcgc
ctagtagatcttcaggcacgtttaagggatgagattgatcaacagcaacaagagataatg
gcaatgccagataggccatatcgcaagtttgttaggctgtgtgaacgtcagcgcatggaa
cttgctagacaagtgcaggcatctcagagagcagtaagggagaagcaactcaaatctata
tttcagtggcgtaagaagcttcttgaggctcactgggccattcgtgatgcccgtacagcc
cgcaacaggggagttgccaaatatcatgagaagatgttgcgggagttctcaaaacgtaaa
gatgatgacagaaacaaaaggctggaagccttaaaaaacaatgatgttgacagatatagg
gagatgttgctggagcagcagactagcatccctggtgatgctgcagagagatatgctgtt
ctttcaactttcttaacccagactgaagagtatctacacaaattaggaagtaagataacg
gctgctaaaaatcaacaagaagtggaggaagcagcaaaggctgctgcagccgctgctcga
ttgcagggtctttctgaagaagaagtccgagcagctgcagcttgtgctggagaggaagtg
atgattagaaatcgttttctggagatgaatgctcctagagacagttcatctgtcaacaag
tattacaaccttgcccatgctgtgaatgaaacagtcataaggcagccatcaatgttacgt
gctggaacattgagagactatcagcttgttggtttgcaatggatgctttctttgtataac
aacaagttaaatggaattttggcggatgagatgggtcttggcaaaactgtacaggttatg
gcattgattgcttacttgatggaatttaaaggaaactatggcccacatcttataatagtc
ccaaatgctgttttggttaactggaagagtgagttttataattggttgccatctgtttca
tgcattttttatgttggaagcaaggatcatcgatcaaaattattttcccaagaggtttgt
gctatgaaatttaatgtccttgtgactacttatgagttcatcatgtatgaccggtcaaaa
ctttcaaaaattgactggaagtatatcataattgatgaagcacagagaatgaaggataga
gattcagttttagctcgtgatcttgatagatatcgttgtcaaagacgtcttcttttgaca
ggaacaccattacagaatgatttgaaggaactctggtctctcttaaatttacttcttcct
gaagtttttgataataagaaagccttcaatgattggttttcgaaaccatttcaaaaggaa
ggtcccactcaaaatgtagaggatgattggcttgagacagagaagaaagtcattattatc
catcgacttcatcagattcttgagcctttcatgctcaggcgtcgtgttgaagatgttgaa
ggctcacttcctcctaaggtcagcatagttctgaaatgtaaaatgtcagctgtccagagt
gccatttatgattgggtcaaatcaactggtacccttcgtcttgatcctgaggatgagaaa
cacaagcttcataggaatccagcataccaggtgaagcaatataaaactttaaacaacaga
tgcatggagctgcgcaagacttgcaatcatccattgcttaattacccattcttcagtgat
ctatctaaggaattcattgtaagatcttgtgggaaattgtggatcctggataggatcctc
ataaaacttcaaagaactggacatcgagttctacttttcagtaccatgacaaaacttcta
gacatcttggaagaatatctacagtggcgaagacttgtttacagaagaattgatgggact
actagtttggaagaccgtgaatcagcaatagtggacttcaatagccctgattcagattgt
ttcattttcctgctcagtattcgagctgccggacgaggccttaaccttcagtctgctgac
acggttgtcatttatgatcctgatccaaaccctaaaaatgaggagcaggctgtggccaga
gctcatcgtattggacagaaaagagaagtcaaagttatatacatggaagctgttgttgac
aaaatcgctagtcatcagaaggaagatgaactgagaagtggaggcactgttgatatggag
gatgaacttgcaggtaaggatcgctacatggggtccattgagagcctcataaggaacaat
attcaacaatataagatagatatggctgatgaggttattaatgctggacggtttgatcaa
agaacaacacatgaagagaggcgtttgactttggagacattattacatgatgaagaaagg
tatcaagaaactgtccatgatgttccctcactacaggaggtaaatcgcatgattgccagg
agtaaagaggaaattgaactgtttgatcaaatggatgatgaacttgattggattgaggag
atgacacgatatgatcatgtgcctaagtggcttcgagccaatacaagagaagtaaatgct
gctattggtgctctatcaaaaagatcatcaaagaatactttattgggtggtagtattggc
atagaatcaagtgaatttggttctgaaagaaaaaggggacgacccaagggaaaaaaacat
cctaattataaagagttggatgatgaaattttggaatactctgaagtaagttccgatgaa
agaaatgaatatgcacatgaagaaggagaaatgggagaatttgatgatgatgggtatagc
atggctgatggagcgcagaccattgataaagatcaattggaagatggtctgctttgtgat
gctggatatgaatttcctcaatctttagaaagtgccagaaacaatcagatggttgaagaa
gctggcacctcaggatcgtcctcagacagtcaaagagtgagacagatagtatctccatca
gtctcctctcagaaatttggatccctctctgcattagatgctaggccaagttccatttca
aaaaggatgacagatgagttagaggaaggggaaattgcagtatctggtgattctcacatg
gaccatcaacagtctggaagttggattcatgatcgtgatgaaggtgaggatgaacaagtt
ttgcagaaaccgaagattaaacgtaaacgcagtcttcgtgttcgacctcgccatgccact
gaaagacctgaagaaaaatctggtagtgaaatggcatctcatttggcagtccaagcagac
cacaaatatcaagcgcaactaaggactgacccagaatccaaactatttggtgactccaat
gccagcaggcatgaacaaaacacaccagcgttaaaaaataagcgaaccttaccttcaagg
agagttgccaatacatccaaattacatggatctccaaagtcaagccgtttgaattgcatg
tctgtgccttcacaagatgctggtgaccactccagagaaagctgggaaggaaaacctatc
aattcaagtggatcttcagcacatggcactaagatgactgaaattatccagagaaggtgc
aaaaatgtaattagcaagctccaaaggagaatagacaaggaaggccatgagattgtgcct
ttgttaatggatttgtggaagaggattgaaaattctggatctggaaacagcctgttagat
ctgcgaaagattgatcagcggattgataaatttgagtataatggagcaacggagcttgta
tttgatgtgcagttcatgttgaagagtgcaatgcatttttatggtttttcacatgaggta
agaactgaagcaaggaaggttcatgatctcttttttgagatcttgaaaatcgcatttcct
gatacggacttccgagatgcaagaagtgcactttctttctccagtcaagctgctgctggt
acagtaacatccccaaggcaagcggctgttagccaaagcaagaggcacaggctgataaat
gagatggaaaccgagtcatacccttcacagaggtcactgcaacgtggatcagcttctagt
ggtgaaaacaacagaattaaagtccatttgccacagagggaatcaagaactggaagcggt
gggggcagcagcaccagggagcaacagcaggaagattcttcactgctcgcgcatccgggt
gaacttgttgtatgcaagaagagaagaaatgacagggagaaatctgctgtgaaacctaaa
actggtcctgtttcaccatctagcatgagaactccaggtccatcttcagtccccaaagaa
gctaggttaactcaacagggttcccatgcacaagggtgggctggccagccatctcaacaa
ccaaatggatctggtgggtcagttggctgggcaaaccctgtaaaaaggctaagaacagat
tctgggaagagaagaccaagccatacatag
DBGET
integrated database retrieval system