Glycine soja (wild soybean): 114390022
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Entry
114390022 CDS
T06057
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1-like
KO
K28108
shortage in chiasmata 1
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114390022
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Meiosis-specific proteins
Others
114390022
BRITE hierarchy
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GFIT
Other DBs
NCBI-GeneID:
114390022
NCBI-ProteinID:
XP_028206513
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Position
16:complement(35637133..35644887)
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AA seq
1564 aa
AA seq
DB search
MRTHFLNNDYFALPPPQTFPFLHFPIPRLPPPPPSAVHHLLRFDPPIHLPLHLDPFPVHA
TLSTFLSAVLPHRIRINSHDLATPSNPAIEAEVIFEDRVSEADIKFSNESKIIAFNDKND
DVYETIQFEIPELGTFLENVCVTETERMQMLSLTPEVENTLEMLKPEPSRQYPYEALESV
LLVEDVISEYLMGENAYSLEGHISVQHQPHSDKNKFLILEVDEESLGTPTYLSLVDIVDS
YFENIRSQNFDEQYQSVIEGKELLGSMKHNMMEFFSDECVSKKSLELSDLFPERDFMNML
ETEHVDRNIGLQRTSHANSDLILNFVTFQEFVFLDEDLMQTFEAFYDLKASDDLVSEEWM
LRKEFNFKSFDELIVSNETALTDDTFKSLPVPVISDHKKMITLHDIIVEQFSSLKTRPLS
ASDGIYLSWDLLEEDRCNCKISNWYQNILAKIDLNNQDFGGTSFDDGKLAFDLVFCDDTI
DECDIKQNEEFKKLLSDGMPLVDNHPVEVASGKVIEHVSSKQGSQEQLPEQKAERASLLF
KSLSEISNLDYFLNPKEATGKGNCNYAVESTNANVCIPKVSSNELKVGAQSQVFHTVLHR
VRLSDNIVALAGYFEKSYLAILHSDTEMTKMHNSDADYLKLLGLQKHKLIKYHVNGNNMA
FAVLCAIKQAAWYLCFYGLHPAFLYLDKLCQNLEYLKSKLGFLQSLIKDEKGKVDSNVTM
AHPSLTIVKKILQSYTKQNSSKTLIVAEEVFWYSLKNILLSLGLSFIELNDSYRNQPYAN
TVPKDTDTKTKELLISDCLLVSHKHVFPLFPLNKFDIILEYGGPYDSSRISELSQNLVEL
PHLHFLRVELDGHAALEALCEGVEMPPNIEMLMESETRLIFNHKESMNQNLERLLNFCPV
EQSYDKKSSKVAPEADNHAPLIPAVKTEHDHKSMEVFPGTVMIVNTQNVDKEMIMSRRSS
YQLILAMEKEGIQVVERDLDLPVDIILSSAICLAQYDSRNLGKKATPATEASSSLPLCIE
NIATDVLTLLSFYFRGCFLVFEGELNFLSTVMESSDRLYAAATSLGIDLQIFFSYSPELT
NEVIVSCIKSATNMTRGLYPKMPDSVTFAESFLTEFPGINPLTAHYILSSGVMLNEFLAW
SHEQRMHVLEKYHVPEESISLFSVFCRYGEPEDSKSIMTDCSSSVSSGLDSDRCCLYEVE
NERKRKNPISSDQIDEPSLDELLQFETLNQVVEAVPDSSTLPKPFDFGMSKNAGRSSDLA
NASFSMSEFFSQKQSTGAVTMRNLSGVSYSPGNCKAPHKSEKLKQPSLSLKNKELAQNEI
LGTALMGKGVNWHNFSNSEKLHGDIRGEVADLTDNPLFDKSFATPDSMYFTSLMAETDQM
RKNKIARKLSFDNSSHPASSSSKIWRSFKDTRGQVDNYPEPDFGEDVFPPDFKPRKNIVV
TQASMRNLESPFKEEISHLGITPFSFARQSAIILKNSPWTTEFINKVKEKSGLRQKSLSS
ENSGPYFGYPGSMSKTSKRINPSVIDLFKYQPNRASRNVPEQKRQKQSGPSSNSIKKARY
STST
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcactttctcaacaacgactacttcgctctccctccacctcaaaccttcccc
ttcctccacttcccaatccctcgcctccctccgcctcctccctccgccgtccaccacctc
ctccgcttcgatcctccgatccacctccccctccacctcgaccccttcccggtccacgcc
acgctctccaccttcctctccgccgtcctccctcaccgaatccgcatcaactctcacgat
ctcgccactccgtcaaatcccgcaatagaggcggaggttatcttcgaagatcgtgtctcc
gaagctgatatcaaattttcgaatgagagtaaaattattgctttcaatgataagaacgat
gatgtttatgagacaattcagttcgaaataccagagcttggcacgttcttggaaaacgta
tgtgtcactgagacggagaggatgcaaatgctgtctctaactccagaagttgaaaatact
ctggaaatgctcaagcctgaaccatcaaggcaatatccttatgaggctctggaatcagta
ttgttggttgaagatgtaatttcagagtacttgatgggggaaaatgcatattctctagaa
ggtcatatttctgttcagcaccagccacactctgataaaaacaaatttcttattttggaa
gtggatgaggaaagtttgggaactcccacgtacttgtctttggtagacattgttgactca
tattttgaaaatatcagatctcaaaattttgatgaacaatatcaatctgttatagagggc
aaggaacttttgggttctatgaagcataacatgatggagtttttctcagatgagtgtgta
tcaaagaagagcctggagttatcagatctgtttcctgaaagggattttatgaatatgctg
gaaactgaacatgttgataggaatattggcctgcaaaggacatcgcatgctaatagtgat
ctgatactgaattttgttaccttccaggagtttgtgttccttgatgaagacttaatgcaa
acctttgaagctttctatgacttaaaagcttcggatgatttagtttcagaagagtggatg
cttaggaaagagtttaacttcaagagttttgatgaattgattgttagtaatgagacagca
ctaacagatgacacattcaaatcactgcccgtacctgttatctctgatcacaaaaagatg
ataactctacatgacatcattgtagaacaattttccagcttgaagacccggcccctctct
gcctctgatggaatttacttaagctgggatctacttgaagaagataggtgcaattgcaaa
atctctaactggtatcagaacatattggccaagatagatctgaacaaccaagattttgga
ggaacatcttttgatgatggaaaattggcatttgatctagttttctgtgatgacaccata
gatgaatgtgacattaaacaaaatgaagagttcaagaagttgctttctgatggcatgcct
ctagttgacaatcatccagtagaagttgcttcaggcaaagttatagaacatgtatcttct
aaacaaggaagtcaagaacaattacctgaacaaaaggctgagagggcttcattgttattt
aaatctctgtcagaaatcagcaatcttgattatttcttaaaccctaaagaagcgactggt
aaggggaattgtaattatgcagtagagtccactaatgctaatgtttgcattccaaaagtt
tcatccaatgaattgaaggttggtgcacagtcacaagtgttccatactgttctgcataga
gttagattgtccgataatattgtggcccttgctggatattttgaaaaaagctatctagcc
attctgcacagtgatacagagatgacaaaaatgcataactcggatgcagattatttaaaa
ttgttgggtcttcaaaagcacaagctgattaaataccatgtaaatggaaacaatatggct
tttgctgtgttatgtgctattaaacaggctgcttggtacttgtgtttctatggtctccat
ccagcattcttgtatttagacaaattatgtcaaaacttggagtatttgaaatcaaagtta
ggcttcctccaatctttgatcaaagatgaaaaggggaaggtggacagcaatgttactatg
gcacacccatcattaacaattgtcaagaagattttacagtcatacaccaaacagaatagt
tcaaaaactttaattgtggctgaagaagtattctggtattcattgaaaaatatcctcctt
tcccttgggttatcattcattgaactaaatgattcttatagaaatcagccatatgccaat
actgtgcctaaggacacagatactaaaacgaaagaacttctgatttcagactgcttgttg
gtttcacacaagcatgtttttcccttgtttcctttgaacaaatttgacattatcttggaa
tatggaggcccatatgactcatctaggatatctgagctttcacaaaacttggttgaattg
cctcatcttcactttttgagggttgaattggatggtcatgctgctctcgaagcactctgt
gaaggtgttgaaatgcccccaaacattgaaatgttaatggaaagtgagactcgtctcatt
ttcaatcataaggaaagtatgaaccagaacttggagagactactgaacttttgtcctgtg
gagcaaagctatgataaaaaatcttcaaaggttgcacctgaagcagataatcatgcgcca
ctaattcctgctgtgaaaactgagcatgatcataaaagcatggaggtttttcctggaaca
gttatgatcgtaaatactcaaaatgtagataaggaaatgataatgtctagaagaagctct
taccaattaattcttgcaatggagaaagaaggaattcaagttgttgaacgtgatttagat
ttgcctgtggatattatattaagttctgctatttgcttggcacagtatgatagtagaaac
cttgggaagaaagcaactcctgcgactgaagcatcctcaagcttgcctttatgtattgag
aatattgccacagatgttctgacattgcttagtttttacttccgtggttgctttctggtg
tttgaaggagagcttaactttctttcaactgtaatggaatcctcagataggctctatgct
gcagcaacaagcctgggaattgatttgcagatattcttctcttactcacctgagttgaca
aatgaagttattgtaagctgcattaagagtgctaccaatatgacaaggggtctgtatcct
aaaatgcctgactcagtaacttttgccgagtcatttcttacagaatttcctggaataaat
cctttaactgcacactatatactatcttcaggggtcatgcttaatgagtttcttgcatgg
tcacatgagcaaaggatgcatgttttagaaaagtatcatgttccagaagaaagtatttct
ctattcagtgttttctgcagatatggggaaccggaggattcaaaatccataatgacagat
tgctcctcttcagtatcttctggtctggactcagatagatgttgtttatatgaagttgaa
aatgaaagaaaaagaaaaaatcctataagtagtgatcagatagatgaaccatctttggat
gaattgttgcaatttgagacattaaatcaagtagttgaggctgtcccggattcctctacc
ttgccaaaaccttttgattttggtatgtcaaaaaatgcagggagatctagtgacttggca
aacgcaagtttttccatgagtgagtttttcagtcaaaagcaaagcaccggtgcagttaca
atgagaaacctttctggagtctcttattcaccagggaactgcaaagctccccacaaatca
gagaaactgaaacaacccagtttatccttgaaaaataaagagttggctcaaaatgaaata
ctgggcactgctttgatgggcaaaggtgtgaattggcataactttagtaattctgagaag
ctgcatggagacattagaggtgaggtggcggacttgacagataaccccttatttgataaa
agctttgccactcctgattccatgtacttcacaagtttgatggcagagacagatcagatg
agaaagaataaaattgcaaggaaattgtcatttgataatagtagtcacccagcatccagc
tcatcgaaaatatggagatcctttaaagatacacgaggacaagttgacaactaccctgaa
ccagattttggagaagatgtttttcctcctgatttcaagccccgcaaaaacattgttgta
actcaggcatcgatgagaaacttagaatcaccattcaaggaggaaatctcacatttgggc
ataactccattctcatttgcccgccagtcagctattatattaaagaattcaccttggaca
actgagtttattaataaagtaaaagaaaagagcggattgcgtcaaaaatcattatcaagt
gagaactctggcccttattttgggtacccagggagcatgtccaagacttctaagagaata
aatccttccgtaattgatttgtttaagtaccaacctaatagagcatctagaaatgttccg
gaacagaaaagacagaagcaatcaggtccatcttcaaactcaatcaagaaagcaagatat
tccacttcaacatga
DBGET
integrated database retrieval system
