KEGG   Glycine soja (wild soybean): 114390070
Entry
114390070         CDS       T06057                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5B
  KO
K14963  COMPASS component SWD3
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    114390070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gsj03036]
    114390070
Chromosome and associated proteins [BR:gsj03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     114390070
    NSL complex
     114390070
   HMT complexes
    COMPASS/SET1 complex
     114390070
    COMPASS/SET1 complex (yeast)
     114390070
    MLL-HCF complex
     114390070
    MLL3/MLL4 complex
     114390070
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     114390070
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_WDR19_1st Beta-prop_NWD2_C WD40_like Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_DCAF12 PROPPIN Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_LRRK2 Cytochrom_D1 Beta-prop_RIG_1st Beta-prop_VPS8 RMC1_N VPS8_N Beta-prop_NOL10_N WDR54 Beta-prop_WDR11_1st DUF5888
Other DBs
NCBI-GeneID: 114390070
NCBI-ProteinID: XP_028206558
LinkDB
Position
2:complement(15156271..15159519)
AA seq 320 aa
MATSTTSSGGGGTGTQTFKPYRHLKTLKDHENAVSCVKFSNDGTLLASASLDKTLIIWSS
ATLTLCHRLVGHSEGISDLAWSSDSHYICSASDDHTLRIWDATGGDCVKILRGHDDVVFC
VNFNPQSSYIVSGSFDETIKVWDVKTGKCVHTIKGHTMPVTSVHYNRDGTLIISASHDGS
CKIWDTRTGNLLKTLIEDKAPAVSFAKFSPNGKFILAATLNDTLKLWNYGSGKFLKIYSG
HVNRVYCITSTFSVTNGRYIVSGSEDRCVYIWDLQAKNMIQKLEGHTDTVISVTCHPTEN
KIASAGLAGDRTVRVWVQDS
NT seq 963 nt   +upstreamnt  +downstreamnt
atggcgacgagcaccaccagcagcggtggcggcggcaccggcacccaaacattcaagccg
taccgtcacctgaaaaccctaaaagaccacgagaacgcggtatcgtgcgtgaagttctcg
aacgacggaaccctcctagcctcggcctccctggacaaaaccctaatcatatggtcctcc
gccaccctcaccctctgccaccgcctcgtgggccactccgagggcatctccgacctggcc
tggtcctccgactcccactacatctgctccgcctccgacgaccacaccctccgcatctgg
gacgccaccggcggcgactgcgtcaagatcctccgcggccacgacgacgtcgttttctgc
gtaaacttcaacccccagtccagctacattgtctcgggttccttcgacgagaccattaag
gtttgggatgtgaagaccgggaaatgcgtccacactataaagggccacaccatgcccgtc
acctccgtccactacaaccgcgacggaaccctcatcatctccgccagccacgatggctcc
tgcaagatttgggacaccagaaccggcaatctcctgaagaccctcatcgaagataaggcc
cccgctgtctccttcgccaaattctcccccaacggcaagttcattctcgccgccactctt
aacgacacccttaagctatggaactacgggagtgggaaatttttgaaaatttattctggg
cacgtgaatagagtatactgcataacttccacattttctgtgactaatgggagatatatt
gttagcggttctgaagatcgctgtgtttatatatgggatcttcaggcgaaaaatatgatt
cagaaacttgaaggccatacagatactgtaatatcggttacttgtcacccaaccgagaac
aaaattgcctctgctggtctcgctggtgatagaactgtgagggtttgggtgcaggattcc
tga

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