Glycine soja (wild soybean): 114390231
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Entry
114390231 CDS
T06057
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1-like
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
114390231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114390231
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
114390231
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_DCAF4
EIF3I
Pkinase
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
WD40_RFWD3
PK_Tyr_Ser-Thr
Lsr2_DNA-bd
Chropara_Vmeth
Motif
Other DBs
NCBI-GeneID:
114390231
NCBI-ProteinID:
XP_028206739
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Position
16:2622575..2629647
Genome browser
AA seq
1023 aa
AA seq
DB search
MATANGGTGAEKHKRKTNDPFLKQGGHQLMPRSPRLCTPIRKEWPESFPNDNVIGNEDNG
LNRYITSLAGSGPPGTSFCSSIDSEHIVEELPVRNYKNPNYLTIESKYNRLSREIVPKVE
EQIPLRLSKGLKGIDSEFWGLKSLPGKSVNHDSLNVSEGRSNMGKAIISNNAHLISSITQ
STSSAYNYPQLIVKQTKKGKGIICEDLNQSFSTGGALNSQEDEKPAFAAKFQSETLVRSN
VDENKPLLEGTFLSGSKGLNLREWLKSEGHKVNKSGRIRIFKQVLELVDFEHSQGLVLLD
FRPSCFTLLPSSKIKYIGSYGQQELDDEVMTCNVTRKRPLEQNTCACQSLSTKQQKLCEE
TGSSRQQHHGTSIHGCRMTVNQTDSDTNRPVESKSKESLCQNNSICTEEKQFMSAFIKLE
EKWYCSPEVLNDGVCMLSSNIYSLGVLLFELLCNIEPWEAHSTAMLDLCQRILPPKFLAE
NPKEAGFCLWLLHPEPSSRPNARMILESEVMRESEESNSVDDVGISDDEAETEQLLDFLI
LIKEAKKKREAKLEEELNLLNEDIKEVEKSYSFVTDSVFPLVQMNNPEVRGDNLYFQDPS
GSDISRSIRRSFGDEERFMSNLNQLENSYFSMRFRVLPKEASSVSSNEKNVMESRWRLPQ
VENVNKESRRIQSSVGCVGSFFEGLCKFARYSKFEECGRLRNRDLLSSANVMCALSFDRD
EDHIAAGGVSKKIKIFDLNAIASDSVDIQYPVIEMSNKSKLSCVCWNTYIKNHLASTDYD
GAVQMWDADTGQPLSQYMEHQKRAWSVHFSLSDPKMFASGSDDCSVKLWSISERNSLGTI
WKPANICCVQFSAYSTNLLFFGSADYKVYGYDLRHTRIPWCTLAGHGKAVSYVKFIDSEA
VVSASTDNSLKLWDLNKTSSSGLSSDACAMTFKGHSNEKNFVGLSVLDGYIACGSESNEV
YCYHKSLPVPIATHKFESIDHISGHLNSGDNNGQFVSSVCWRKKSNMLVAANSVGIVKLL
QMV
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcaaatggtggaactggagctgagaagcacaagaggaaaactaatgatcct
tttcttaagcaagggggacaccaactcatgccaagatcacctagattgtgcacacctatt
cggaaggaatggccggagagttttccgaatgacaatgtgattggtaatgaggataatggt
ttgaatagatatattacttccttagctggatctggacctcctggtactagtttttgctcc
tcaatagattctgaacacattgttgaagagttgcctgttaggaattataagaacccgaat
tatttgactattgagtctaagtataatagattgagtagagaaattgtccccaaggttgag
gaacagataccactcagattaagcaaaggactcaagggaattgattctgaattttggggc
ctgaagtctcttcctggcaagagtgtaaatcatgactcactgaatgtctcagaaggtaga
agcaatatgggcaaggctatcatctcaaacaatgcacatctaattagcagtataactcag
agtacttcatctgcatataattatcctcaattgattgtaaagcaaacaaagaagggaaag
gggattatttgtgaagatttaaaccaaagcttcagtactggaggagcacttaacagccaa
gaggatgagaaacctgcttttgcagctaagtttcaatccgagacactggtgagatcaaat
gttgatgagaataagcctttattggaaggaactttcttgtctggtagcaaaggactcaac
ttaagagagtggctgaagtctgaaggacataaagtaaataaatcaggaaggattcgtata
tttaagcaggtattggaattggttgattttgaacactctcaaggactcgtcttgctagac
tttcgaccatcttgtttcactttattgccttcaagtaaaattaagtatattggttcatat
ggccaacaagagttagatgatgaagtcatgacatgtaatgtgactaggaaaaggcctttg
gaacagaacacctgtgcttgccagagtttgagtacaaagcaacaaaagctctgtgaggag
acaggatcttcgaggcagcagcatcacggtaccagtattcatggctgccggatgacagta
aatcaaactgactcagacacaaacagacctgtggaatcaaagagtaaagaaagtctatgc
caaaataattctatttgtactgaagaaaagcagtttatgtctgcatttattaagttagaa
gagaagtggtattgtagtccagaagtgctcaacgatggagtatgcatgttgtcatcaaat
atttatagtcttggagttctcctttttgagttgctgtgcaatattgagccatgggaggcg
cattcaactgcgatgttggatttgtgtcagagaatcttaccacctaaatttctagcagaa
aatccgaaggaagctggcttttgtctttggcttttgcatcctgaaccttcttctcgcccc
aatgccagaatgattttagagtcagaagttatgcgtgaatcagaggaatcaaattctgta
gatgatgttggaatatctgatgacgaggctgaaacagagcaattactagattttctaatt
ttaatcaaagaagcaaagaaaaaacgggaagcgaagctggaagaagagctaaatttattg
aatgaagatattaaggaggtagaaaaaagttattcatttgtgacagattcagtatttcct
ttggtgcaaatgaacaatcctgaagtgagaggagacaatttatattttcaagatccttcc
ggttcagacattagtagatccattcgaaggtcatttggtgatgaagaaagatttatgagt
aatctaaatcagctagagaattcttacttttccatgagattccgagtgctgccaaaagag
gcttcatctgtttcaagcaatgaaaaaaatgtgatggaaagtagatggaggttgcctcaa
gtagagaatgttaataaggagtctagaagaattcagagttctgttggttgtgtaggatcc
ttctttgaaggtttatgcaagtttgctcgttacagcaagtttgaagagtgtggcagatta
agaaatagagatctgcttagttctgccaatgtaatgtgtgctctaagttttgaccgtgat
gaggatcacattgcagcaggaggagtttcaaagaaaatcaagattttcgaccttaatgct
attgcaagcgattctgttgacatccagtacccagtaattgagatgtcaaataaatcaaag
cttagttgtgtgtgctggaacacttacattaaaaatcatctggcatctactgactatgat
ggtgcagttcagatgtgggatgcagacacgggtcagccattgtctcaatacatggagcac
caaaagagagcttggtctgttcacttttctctgtcagacccaaaaatgtttgctagtgga
agtgatgactgctctgtcaaactgtggagtatcagcgagagaaattctctgggaaccata
tggaaacctgccaatatatgctgtgttcagttctctgcttactcaacaaatcttctattt
tttggatcagctgattacaaggtttatggttatgatcttcgtcacactagaattccttgg
tgcacattagctggtcatggcaaagctgttagctatgtaaaatttatagattctgaagca
gttgtctctgcttccactgacaactctttaaagctttgggacctgaacaaaaccagctct
tctggtttgtcatctgatgcttgtgccatgacctttaaaggtcatagtaatgaaaagaat
ttcgtgggattatctgttttggatggatacattgcatgtggttcagaatctaatgaggtg
tactgttatcacaaatcactgcctgtgccaattgctactcataaatttgagtcaattgat
cacatttctggtcatctaaatagtggtgataataatggacagtttgtttctagtgtttgc
tggagaaagaaatctaacatgcttgttgctgccaactcagttggaattgtgaaactattg
cagatggtctga
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