Glycine soja (wild soybean): 114390646
Help
Entry
114390646 CDS
T06057
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
114390646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114390646
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114390646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_6
LRR_4
F-box
Motif
Other DBs
NCBI-GeneID:
114390646
NCBI-ProteinID:
XP_028207264
LinkDB
All DBs
Position
2:15708811..15712089
Genome browser
AA seq
585 aa
AA seq
DB search
MRPRVAYSFPEEVLEHVFSFIECDKDRGSISLVCKSWYEIERWCRRRVFVGNCYAVSPAT
VVNRFPKVRSIAIKGKPHFADFNLVPEGWGAYVGPWIKAMAAAYPWLQEIRLKRMVIADE
CLELIAKSFKNFQVLVLTSCEGFTTDGLAAIAANCRNLRELELRESEVDDICGHWLSHFP
DSYTSLVSLNISCLGNEVNLSALERLVSRCPNLQTLRLNRAVPLDRLATLLRGAPQLVEL
GTGAYTTEMRPEVFTNLAEAFSGCKQLKGLSGFWDVLPSYLPAVYPICSNLTSLNLSYAT
IQSPDLIKLVGQCESLQRLWVLDYIEDAGLEVIAASCKDLRELRVFPSDPFGLEPNVALT
EQGLVSVSEGCTKLQSVLYFCRQMSNAALDTIARSRPNMTRFRLCIIEPRAPDYLTHQPL
DAGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGC
DNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDE
RGPPDSRPESSPVEKLYIYRTVSGPRLDMPGYVWRMQDDSALRIS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgagagtagcgtactcgttccctgaggaggtgctggagcacgtgttctccttc
attgagtgcgacaaggaccgcggctcgatctccctcgtctgcaagtcctggtacgagatc
gagcgctggtgtcgccggagagtcttcgtcggaaactgctacgcggtctctccggccacc
gtcgtcaaccgcttccccaaggttagatccatcgccatcaaggggaagccgcacttcgcc
gacttcaatttggtccccgagggttggggcgcttacgtgggcccctggatcaaggccatg
gccgctgcctacccctggcttcaggagatcaggctcaagaggatggtcatcgccgacgaa
tgcttggaactcatcgccaaatcgtttaagaacttccaagtcttggtcctcacctcttgc
gagggcttcaccactgatggacttgcagccattgctgccaattgcaggaatttgagggag
ttggagttgcgggagagtgaggtggacgacatctgtgggcattggctgagccattttcct
gattcgtacacatcactggtttcccttaacatttcttgcttaggcaatgaggtgaatttg
tctgccctagagcgcctggttagtaggtgtcccaatctccagacgctccgcctcaaccgt
gctgtgccactagacaggcttgccactcttcttcgcggtgctcctcagttggttgagttg
ggcaccggagcttacacgacagagatgcgaccggaggtcttcacaaaccttgcggaggca
ttttctgggtgcaagcaattgaagggcttatctggattttgggacgtgctcccttcctac
cttccagctgtctatcctatttgctccaacctgacttcactgaacttgagttatgcaact
attcaaagccctgatcttatcaagcttgttggtcaatgtgagagtttgcagcggttatgg
gtgctggattacatagaagatgctggccttgaagtgattgctgcatcctgtaaggatcta
agggagttgagggtgtttccgtccgacccgtttgggttagaaccaaatgtagcattgaca
gagcagggcctcgtttcggtgtctgaaggctgcaccaagctccagtcagttctatatttt
tgtaggcaaatgtctaatgctgccttagatacaattgccaggagcaggcctaatatgaca
cgttttagactatgtattattgagcctcgagctcctgactatctcacccatcaacctctg
gatgctggttttggagctattgtagagcattgcaaggatcttcagcgactttccctttct
gggcttctaactgaccgtgtttttgagtatattgggacttatggtaagaagcttgagatg
ctttctgtggcttttgctggagatagcgatttgggactccatcatgtgctgtctgggtgt
gacaaccttaggaagctggagatcagggactgcccctttggtgacaaagcccttttggcc
aatgctgcaaagctggagacaatgcgatccctttggatgtcctcttgcttggtgagttat
ggagcatgtaaattgctgggtcagaaaatgccaagacttaatgttgaagtcattgatgaa
agaggacctccagattcaaggccggagagtagtcctgttgagaagttatacatatacagg
actgtttctgggccaagattggacatgccaggctatgtatggagaatgcaagatgattct
gcattaaggatttcttga
DBGET
integrated database retrieval system
