Glycine soja (wild soybean): 114391216
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Entry
114391216 CDS
T06057
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114391216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsj03000
]
114391216
03021 Transcription machinery [BR:
gsj03021
]
114391216
Transcription factors [BR:
gsj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
114391216
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114391216
RNA polymerase III system
TFIIIB
114391216
RNA polymerase I system
SL1/TIF-1B
114391216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
114391216
NCBI-ProteinID:
XP_028208056
LinkDB
All DBs
Position
16:complement(30018555..30022994)
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AA seq
200 aa
AA seq
DB search
MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV
IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaaggattggaagggagccagccggtggatctacagaagcatccttctggg
atcgtgcctacccttcaaaatattgtgtccacagtcaatttggactgtaagttggacctc
aaaacaattgcacttcaagctcgtaatgcagagtacaatcccaagcgttttgctgctgtc
attatgaggataagagatcccaaaacaactgcacttatttttgcttctggcaagatggtt
tgtactggagctaagagtgaacaacagtctaaattggcagcaaggaagtatgctcgtatt
atccaaaagcttggcttcccagccaaatttaaggatttcaaaattcagaacattgtcggc
tcttgtgatgtcaagttccccatacggctggagggtcttgcatattcccatggtgctttc
tcaagttatgaaccagagctgtttccagggctaatctaccgtatgaagcaacctaaaata
gttttgcttatatttgtctctggaaaaattgttctaacaggagccaaggtgagagatgag
acttacactgcctttgaaaacatatatcccgtgcttactgagttcaggaaaaaccaacaa
tga
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