Glycine soja (wild soybean): 114391261
Help
Entry
114391261 CDS
T06057
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114391261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114391261
Membrane trafficking [BR:
gsj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114391261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
Beta-prop_WDR5
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
WD40
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_THOC3
Beta-prop_Aladin
WD40_Prp19
zf-RING_Vps41
zf_RING_Vps8
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
114391261
NCBI-ProteinID:
XP_028208128
LinkDB
All DBs
Position
16:complement(1619676..1632383)
Genome browser
AA seq
1910 aa
AA seq
DB search
MELDLRSFLHSPTSSDDAPHRTIDDILNDCDTSSSSPSPPSSPSHSLSNNSHPQNSTLQP
APDSFSRFKPTEFSDRARVSRPFSSLLHSVRSNAKPGAALAAAAAASRSVPTPHAAAIIS
RRKSAAAISVESSLIAANGDDSSAVSAKGELGEPSEKFDPVPPMIPPPSESASAIGERFE
SDVEIATDLKAGSDDIQVHSDNNINANVNDDDDDENDNDSSIVSEEKRDLDKVDCDHEKD
MNSAPFDEDDDRGFDGNDDDDERITATYAAVETEEEEEEEEEEVVNNGSSSMEDVRNEVS
VGGGDDDGSSLGDVAELVEERLEELENRRAAKRAEKKRESLMKPLELAEELEKKRASTGL
HLEEGAAAQPMRLEDVRRGSMTLGYFDVDADNAFTRAISSQTFRREQGSARTLAVHANYI
AVGMSKGLIVVFPSKYSIHHADNSDGKMMMLAIQGDRLHAPVTSMSFNQQGDLLLAGYGD
GHLTLWDVQKGVVVKVISGEHTAPVVHTLFLGQDPQNTRQFKAVTGDCKGLVLFHIISVV
PLFSRFSIKTQCLLDGQSTGLVLSASPLLFDDFSGSASPFTRGNTSAPASSISSMMGGVV
GGDAGWKLFNEAPSLVEEGVVVFVTHQTALVVRLSPTLQVYAQLSRPDGVREGSMPYTAW
KYMTQTCSSTENMSAEAVERVSLLAIAWERKVLVAKLVKSELKVYGRWSLDGAALGLAWL
DDQMLVVLTSNGQLYLFSKDGTVIHQTSFSIDGIGGDDLVSYHTHFINIFGNPEKAYHNS
VAVRGASIYILGPTHLLVSRLLPWKERISVLRKAGDWMGALNMAMILYDGHAHGVVDLPR
TLDAVHEAIMPFLMELLTSYVDEVFSYISVAFCNQIGKLDQSNDSNSRSNSVHSEIKEQY
ARVGGVAVEFCCHIKRTNILFDEIFNKFVDVQQRETFLELLEPYILKDMLGSLPPEIMQE
LVEYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYVFNKGLDDFTAPLE
ELFAVLQNSQKESATVLGYRMLVYLKYCFTGLPFPPGRGSIPPTRLPSLRRELVEFLLKD
SCTPKSQTVSDFVSRRPCLNLYLLLKLDTEATLDVLRCAFMEDGISNASSSSPDSANKPI
EEAKKENDITETQNALVQNTVDALIQIIDVNIVPTDTTSGSGDDELIKECPSKDIGYVFE
FIAYYVALQRAKISKGVLCQILEYLTSDSQFSTNVSVQGSTPKNREKQVLALLEVLPEPD
WDASFVLDLCERAKYHKVCGLIHSIRHEYVAALDSYMKDVDEPVHAFSFINRAFSQLTDN
DHAAFRSAIILRIPELVELSREGAFHMVISHFRDESSRIITELHSHPRSLFLYLKTLIEL
HLFGTLDLSNLRKDDTMNPLNRRQVKDHPQGVKDYLENISNFPKYMCENPIQVPDDLIEL
YLELLCKYEGGSVLKFLEMFDSYRVEHCLRLCQEYGIIDASAFLLERVGDVGSALSLTLS
DLNNKFVDLDASVEAVVLNHRRDGSSHMEIFNSVLKTKEVNDIHNLLRACIGLCQRNTPR
LNPEESEAHWFKLLDSFCDPLMDSNVEERAHESKNYFGVLAGSADSQQDKDTHENSWKIL
KSQNGHILKKLLSQFIKEIVEGMIGFVHLPTIMSKLLSDNGSQEFGDFKHTILGMLGTYG
FERRILDAAKSLIEDDSFYTMSLLKKGASHGYALGSLVCCVCNCPLTKNSVSSGIRIFNC
GHAIHLQCEVSEIEESSKTSSSGCPVCMPNQKSQQSRNKSIIAANGLVNKFSSRHQYPHG
SSIHPHDSDLSDNMYGQQQISRFQILSSLQKNQRFMQIENLPPLKLAPPAVYHEKVSKVA
NFLTGETSNSSSAIEKQNRNKHNRELRFKGSSIRFPLKSTIFGKEKTNKR
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgacctccgttcgttccttcactctcccacctcctccgacgacgctcctcac
cgcaccatcgatgatattctcaacgactgtgacacttcctcttcctcaccctcccctcct
tcttctccctctcactcactctccaacaattcccatcctcaaaactccacactccaaccc
gcacccgattcgttttctcggttcaaacccactgaattctccgaccgtgcacgcgtttcg
cgcccgttctcctctctactccacagcgtcaggtccaatgccaagcccggcgcggcgctc
gccgcggcggcggcggcatctcgatccgttcctacgccgcacgcggcggcgatcatctcc
cggaggaaatccgcggccgcgatcagcgtcgaatcgagtttaatcgctgccaacggcgat
gattcttccgctgtttctgccaaaggcgaattgggcgagcctagcgagaaatttgatcca
gtgccgccgatgattcctccgcctagtgaaagtgcttctgctattggtgaacgttttgag
agtgatgtggaaattgccactgatttgaaggctggcagtgatgacattcaggtgcacagt
gataataatattaatgctaatgttaatgatgatgatgatgatgaaaatgataatgattct
tctatcgtgagtgaggagaagagggacttagataaagttgactgtgatcatgagaaggat
atgaattctgcaccgtttgatgaagatgatgatcgtgggtttgatggaaatgatgatgat
gatgagagaatcacagctacgtatgcagctgtggaaacagaagaagaagaagaagaagaa
gaagaagaagtagtgaataatggtagtagttctatggaagatgttaggaatgaggtgagt
gttggtggtggtgatgatgatggtagttcattaggtgatgttgctgagctagtggaagag
aggctcgaggaattggaaaacagaagggctgctaagagagccgagaagaaacgagagtct
ttgatgaagcctcttgaattggctgaggaactggagaagaagcgtgcttcaactggtttg
catttggaagagggtgctgctgcccagcccatgaggcttgaggacgttcggagagggtcc
atgacgttgggatactttgatgttgatgccgataatgcgttcacgagggcaatttcgtcc
caaacattcaggcgtgagcaaggttccgcccgaaccttggcagttcatgctaattacatt
gcagtgggaatgtcaaaagggctcattgttgtgtttcccagtaaatattccattcaccat
gctgacaactctgatggaaagatgatgatgcttgctatacaaggtgatcggttgcatgct
ccagtgacatccatgtctttcaatcaacaaggagaccttcttttagctggttatggtgat
ggtcatcttaccctgtgggatgtacagaaaggggtagtggttaaagttattagtggtgag
catacagcaccagtagtacatacattgtttctaggacaggatcctcagaatactcgtcag
ttcaaagcagttactggtgactgtaagggtctggttctcttccacattatctcagtggtt
cctttatttagtagattctccatcaaaactcagtgtcttcttgatgggcaaagtacgggc
ttggtgctttcagcttcaccactcctttttgatgacttcagtggaagtgcttcacctttt
accaggggaaacacctctgccccagccagcagtataagcagcatgatgggaggtgttgtt
ggcggagatgcaggttggaaactcttcaatgaagccccttctttggttgaagaaggtgtg
gttgtatttgtcacccatcaaactgctttggtggtacggctgagccctacgttgcaagtc
tatgctcagctctctaggccagatggagttcgggagggttccatgccatatactgcatgg
aaatacatgacgcaaacttgtagttctactgaaaatatgtctgcagaagctgttgaaaga
gtttcattgcttgcaattgcttgggaacggaaggttctggttgcaaagttggtcaaatca
gaattaaaagtatatggaagatggtctcttgacggtgcggctttaggtctagcatggttg
gatgatcagatgctggtagttctcacttcaaatggacaactgtatttattttccaaggat
ggaactgtgattcaccaaacaagtttttccatagatggtattggaggagatgatctagtc
tcttatcatactcacttcatcaatatatttggaaatcctgagaaagcttatcataactct
gttgctgtaagaggagcttctatttatatactgggcccaacacatcttcttgtttctcgt
cttctcccttggaaagagcgtatttctgttttgcggaaagcaggtgactggatgggtgcc
ttgaacatggcaatgattctttatgatggccatgctcatggagttgttgaccttcctaga
accttggatgctgtacatgaagccataatgcccttcttgatggagttgcttacatcatat
gttgatgaagtgttctcatatatttcggtggcattctgcaatcaaattggaaaactggac
caatccaatgattcaaatagtagaagcaattcagtgcattctgagataaaggaacaatac
gcccgcgttggtggagttgccgttgaattttgttgtcatatcaaacggacaaacattctt
tttgatgaaattttcaacaaatttgtggatgttcaacagagagaaacgtttttggagctt
ctggagccatatattttgaaggacatgcttggatctctacctcctgagattatgcaagaa
ctagtagagtattatagcaccaaagggtggttacagcgggttgagcaatgtgtacttcac
atggatatatcatccttggattttaatcaggttgtcaggttatgccgggagcatggacta
tatagtgcgctggtgtatgtcttcaataaaggattagatgattttacggcacctctggag
gagttgtttgctgtcttacaaaatagccaaaaggaaagtgctactgtgcttgggtatcga
atgctggtttatctcaagtactgctttacaggtcttccctttccaccaggccgcggaagt
attcctcccacacgcttaccatctcttagaagagaacttgtagagtttttgttaaaggac
tcctgtactccgaaatcacagacagtttcagactttgtgtccagacgaccctgcctgaat
ctttatcttctcttaaagttagacactgaagctacattagacgtcctcagatgtgctttc
atggaagatggaatttcaaatgccagctcatcttcaccagattcagccaataaacctata
gaggaagcaaaaaaggaaaatgatattactgaaactcaaaatgctttggttcagaacaca
gttgatgctctcattcaaataattgatgtgaatattgttcccacagatacaacctctggt
agtggtgatgatgaattgataaaagagtgtccttccaaggacataggttatgtgtttgag
ttcattgcgtattatgttgctctccaaagggctaagatttcaaagggtgtgctttgtcaa
atattggaatatttgacatcagatagtcagttttcaactaatgtttctgttcaagggtca
actccaaaaaatagagagaagcaagtgcttgcacttttggaagtacttcctgagccagac
tgggatgcatcatttgtgctagatctatgtgagagagcaaaatatcataaggtttgcgga
ttgatccatagtatcagacatgaatatgtggctgcattggatagttatatgaaagatgta
gatgagcctgttcatgctttctcctttattaacagagcattctcacagttgactgacaat
gaccatgcagcttttcggtcagcaatcatattgcgaattcctgagttggttgaactaagc
agggagggcgcgttccatatggttatcagtcattttagggatgaaagttctcgtatcata
actgaacttcactctcatccaagaagtcttttcctttatttaaagacactcattgagctt
catttatttggcaccctagacctgtctaatttgagaaaggatgatactatgaatcccctt
aatagaaggcaggtcaaggatcacccacaaggagtcaaagattacttagagaatatatct
aatttccccaagtacatgtgtgaaaatcctattcaagtgccagatgatcttattgagctt
taccttgagttattatgcaagtacgaaggtggttcagttctcaagtttctggaaatgttt
gatagctatcgagttgaacattgtttacgcctgtgccaagaatatggcattatagatgca
tcggcgttcttattagaaagggttggtgatgttggtagtgctctttcacttacactttct
gatctaaataataagtttgttgatcttgatgcctctgtggaagctgtagttttaaaccat
cgcagagatggttcttcacatatggaaatattcaacagtgttttaaaaacaaaggaggta
aatgacatccacaatttattgcgtgcctgtattggtctgtgtcagcggaacacccctcgt
ctaaatcctgaggagtcagaggcacattggtttaaattacttgactcgttttgtgaccca
ctgatggattcaaatgttgaagagagagcacatgaaagtaaaaattattttggagtgcta
gctggatcagcagattcacaacaggacaaagacacccatgaaaacagttggaaaatttta
aagtctcagaatggtcatatcttgaaaaaattgctatcccagttcattaaagagattgtt
gagggaatgattggttttgttcaccttccaactatcatgtctaaactcctgtctgataat
ggtagtcaagaatttggtgattttaaacataccatattgggaatgctgggaacatacggc
tttgaaagaagaattctggatgctgccaaatcgttaatagaggatgattctttttatact
atgagtttactcaaaaaaggggcctcccatggatacgctctcgggagtctcgtgtgctgt
gtttgtaattgcccccttacaaagaactctgttagctctggaattcggattttcaactgt
ggccatgcaattcatctccaatgtgaagtttcggaaattgaggaatcgagtaaaacatct
tcatctggatgccctgtatgcatgcctaaccagaaatcccagcagtctagaaacaaatca
atcattgcagcaaatggcttggtcaataaattctcatcaaggcaccaatacccccatgga
agttccattcatcctcatgacagtgatttgtcagataatatgtatggacaacaacagata
tcacggttccagatcttgagcagcttgcagaagaatcagagatttatgcaaatagaaaac
ttgcctccattgaagcttgccccacctgctgtgtaccatgaaaaggtaagtaaagtggca
aactttctgaccggagaaactagcaatagttccagtgctattgagaaacaaaatagaaac
aagcataatcgggagctgagatttaagggttcatcaattcgatttcctttaaaatcaact
atatttggcaaggagaagaccaataaacggtga
DBGET
integrated database retrieval system
