Glycine soja (wild soybean): 114391695
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Entry
114391695 CDS
T06057
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Module
gsj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114391695
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
114391695
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
114391695
NCBI-ProteinID:
XP_028208469
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Position
17:complement(34855861..34872155)
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AA seq
452 aa
AA seq
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MTTRATTIPDWEKTMNQIKTYDAEDWKDLEKLNPASWTRSAFKLSTKCDLQVNNMCEEFN
NDLFKIGILIFSTVSCNSWVGHGQRFDVLNYGAKGNGRSDDTNAFVQAWKALCGASNGTS
TLVVPAGHTFFVRQTRFRGPCQSQKLDIQIMGNLLAPTKDAWKKCSGPWLYFLDVRGMTV
HGSGVINGQGRDWWGKPYGTGACSHMPTALLFQRCDGLQISGLTHINGPGSHIFVVHSQD
ITISNIDIYSPLESHNTDGIDLTNSVRVNIRDSIIRTGDDCIAMKGGSKFININNVTCGP
GHGISVGSIGQGGQEEFVENVNVSNCIFNGASSAARIKTWPGGKGYAKNIAFQNISVNQT
DYPIYLSQHYMGTPEKKDAVKVSDVTFSNIHGTCISENAVVLDCAKIGCDNIALKQINIT
SIDPKKPASAKCNDVHGKATDIVSPPVHCLHR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacaactcgagcaacaactatccctgattgggaaaagaccatgaatcaaattaagact
tatgatgcagaagattggaaggatctggaaaagttaaaccctgcttcttggacaagatct
gcttttaaactaagcacgaaatgtgatttgcaagtcaacaacatgtgtgaggaattcaac
aatgacttgttcaaaattggcattttgatattttctactgtttcctgcaattcgtgggtt
ggacatggccagagatttgatgtgcttaactatggtgccaaaggaaatggccgctccgat
gatactaatgcttttgtgcaagcatggaaagctttatgtggagcaagtaatggcacttcg
acacttgtggtgccagctgggcatacattttttgtgcgccaaacaagattccgaggtccc
tgccaatctcaaaaacttgatattcagattatgggcaacctacttgcacctacgaaagat
gcatggaaaaaatgttcaggaccgtggctttatttccttgacgttcgcggaatgacagtt
catggatcaggagtaatcaatggtcagggacgagattggtggggcaaaccatatggaact
ggagcatgcagccacatgcctacggctcttcttttccaaagatgtgatggccttcaaata
agtggcctcactcacatcaacgggccaggatcacacatctttgtagtccatagccaagac
ataaccatctcaaatattgacatatactctccactggaaagtcacaacaccgatggaatt
gatcttacaaattcagttcgggttaacattagagactctatcataagaaccggcgacgac
tgcattgctatgaaaggtggctcaaaattcatcaacattaacaatgttacatgtggaccc
ggtcacggcattagtgtggggagtatagggcaaggtgggcaagaagaatttgtagaaaat
gtgaacgtcagtaattgcatattcaatggagctagtagtgcagctagaatcaagacatgg
cccggtggaaaaggatacgccaagaatattgccttccagaatatcagcgtcaatcaaaca
gattacccaatatatctttcccagcattacatgggcaccccagaaaagaaggacgcagta
aaagtgagtgatgtcacatttagtaatatccatggaacatgtattagtgagaatgcagtt
gtgctggattgtgccaagatcgggtgtgacaatattgccctgaaacaaatcaacattacc
tcaatcgatccaaagaagccagcttctgcaaagtgcaatgatgttcatgggaaggctact
gacattgtttctcctcctgtccattgtctgcatcgctaa
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