Glycine soja (wild soybean): 114391876
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Entry
114391876 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114391876
03041 Spliceosome [BR:
gsj03041
]
114391876
03036 Chromosome and associated proteins [BR:
gsj03036
]
114391876
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114391876
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114391876
mRNA cycle factors
Common to processing body (P body) and stress granule
114391876
Spliceosome [BR:
gsj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114391876
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114391876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114391876
NCBI-ProteinID:
XP_028208672
LinkDB
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Position
2:27741327..27756133
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AA seq
611 aa
AA seq
DB search
MRTSWADSADNSAIGSGITNASACPSRGAYVPPHLRNRALSSEVPLAAASHPAVALGNDR
VNHSGPAPHQGGGYFKPDHGRQQQQGYGSGFQSGGGGGWNGRGVGRDRGRREANPFENVE
AEDQSFSEQENTGINFEAYDDIPVETSGENVPLPVNSFAEIDLGVALNQNIQRCKYVKPT
PVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYAQRPRVARTAYPLALIL
SPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLE
RARLSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTLLFSATFPKEIQAL
ASDFLSRYVFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQRETGVNGKQGLTLV
FVETKKGADALEHCLCVNGFPAASIHGDRTQQERELALRSFKTGNTPILVATDVAARGLD
IPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNFNMAKPLADLMQEANQE
VPAWLSRYAARATYSGGNRNRKSGGSRFGGRDFRKEGSFNKATDYYGGGTGGGYCGNYGG
GYGQGVPSAWD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttcgtgggcggattctgctgacaactctgccattggttctggcatcaccaat
gcctcggcttgcccttcccggggagcttatgtaccgccacatcttcggaaccgggcattg
tcgtcagaggttcctctggcggcagcgtcacacccggcggtggctctggggaatgaccgg
gttaatcatagtggtccagctcctcatcagggtggtggttactttaaacctgatcacggg
cggcagcagcagcaaggatatggttctggttttcagagtggtggtggcggtggctggaat
ggtagaggggtggggagggaccgtgggaggcgtgaggcgaacccttttgagaatgttgaa
gctgaggatcaatcttttagtgagcaagagaatacggggattaactttgaggcatatgat
gatatccctgtggagactagcggggagaatgtgccactgcccgtgaattcattcgcggaa
atagatttgggtgtggcattgaatcagaatatacagagatgcaagtatgtgaaaccaacc
ccggttcagaggtatgccattccgatttctcttgcggggcgagacttgatggcctgtgct
cagactgggtcaggaaagacagctgccttttgcttccctattataagtggaatcatgagg
gagcaatatgctcaaaggccgcgtgtggctcgaactgcttatccgctggcacttatcctc
tcccctacaagggagctttcatgtcagatacatgatgaggccaaaaagttttcttatcaa
actggtgtcaaagtggtggttgcttatggaggagcaccaatcacccaacagttacgggag
cttgagagaggcgttgatattctggtggcaactccaggacgattggtggatttgcttgag
agggctaggttgtcattgcagatgataagatacttggctcttgatgaggcagatcggatg
ctggatatgggttttgagcctcaaataagaaagatagttgaacaaatggacatgcctcct
ccaggcatgagacagacgctgttgtttagtgccacatttcccaaagagatacaggctctt
gcatcagattttctttcacgttatgtgtttctggctgttggaagggtcggttcaagtact
gatctaattgctcaaagagtagaatatgtgctcgagtcagacaagagaagccacctcatg
gaccttcttcatgctcagagggaaactggagttaatggcaagcaaggtctgacattagtt
tttgtggaaacgaagaaaggagctgatgcattggaacactgcttgtgtgttaatggattt
cctgcagctagcattcatggtgacagaacacaacaagaaagagaactagcattgaggtca
ttcaagactggaaacacaccaattctagtggcaacagatgttgctgcacgtggtcttgac
atcccacgggtagcacatgtggtaaattttgatcttcccaatgacattgatgattatgtg
caccggataggaagaacggggcgagctggtaaaatgggattagcaacggccttcttcaac
gaaggtaatttcaacatggctaaaccattagctgatctgatgcaagaagcaaatcaagaa
gtacctgcctggctcagccgttatgcggcaagggctacttacagtggtggcaacagaaat
aggaagtcggggggatcccgttttggtggccgagattttaggaaagagggctcgtttaat
aaagcaacagattactatggtggcggaactggtggtggatattgtggcaattatggtgga
gggtatggtcaaggtgtgcctagtgcttgggattag
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